 |
Job Description | P0AFW0 | Confidence | 13.62% | Date | Thu Jan 5 11:27:24 GMT 2012 |
Rank | 65 | Aligned Residues | 21 |
% Identity | 14% | Template | c2vv5D_ |
PDB info |
PDB header:membrane protein | Chain: D: PDB Molecule:small-conductance mechanosensitive channel; |
PDBTitle: the open structure of mscs
|
Resolution | 3.45 Å |
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | Y | P | G | D | K | V | I | I | T | E | G | A | F | E | G | F | Q | A | I | F | T | E | P | D |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |
|   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|   |
| . | . | . | . | . |   |
|   |   |
|   |
|   |   |
|   |
Template Sequence |   |
P | F | R | A | G | E | Y | V | D | L | . |
. |
. |
. |
. |
G | G | V | A | G | T | V | L | S | V | Q |
Template Known Secondary structure |   |
S | S |
| T | T |
|  |  |  | S | . | . | . | . | . | S | S |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 140 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|