Job Description P0AFW0 Confidence 99.92% Date Thu Jan 5 11:27:24 GMT 2012 Rank 5 Aligned Residues 106 % Identity 17% Template c2k06A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription antitermination protein nusg; PDBTitle: solution structure of the aminoterminal domain of e. coli2 nusg Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.										.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	W	Y	L	L	Y	C	K	R	G	Q	L	Q	R	A	Q	E	H	L	E	R	.	.	.	.	.	.	.	.	.	Q	A	V	N	C	L	A	P	M	I	T	L	E	K	I	V	R	G	K	R	T	A	V	S	E	P	L	F	P	N	Y	L	F	V	E	F	D	P	E	V	I	H	T	T	T	I	N	A	T
Query Conservation																								.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	W	Y	V	V	Q	A	F	S	G	F	E	G	R	V	A	T	S	L	R	E	H	I	K	L	H	N	M	E	D	L	F	G	E	V	M	V	P	T	E	E	V	V	E	I	R	G	G	Q	R	R	K	S	E	R	K	F	F	P	G	Y	V	L	V	Q	M	V	M	N	D	A	S	W	H	L	V	R	S	V
Template Known Secondary structure											T	T	S																T		T	T	T				B			S	S		S	S			S				S	S	T	T	S						T	T																			S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		73	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		R	G	V	S	H	F	V	.	R	F	G	A	S	P	A	I	V	P	S	A	V	I	H	Q	L	S	V	Y	K	P	K	D	I	V	D	P
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		P	R	V	M	G	F	I	G	G	T	S	D	R	P	A	P	I	S	D	K	E	V	D	A	I	M	N	R	L	Q	Q	V	G	D	K	P
Template Known Secondary structure		S	S						S	S	S	S	S	S				B																	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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