 |
Job Description | P0AFW0 | Confidence | 8.98% | Date | Thu Jan 5 11:27:24 GMT 2012 |
Rank | 91 | Aligned Residues | 55 |
% Identity | 15% | Template | c1vhkA_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:hypothetical protein yqeu; |
PDBTitle: crystal structure of an hypothetical protein
|
Resolution | 2.60 Å |
|
 |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | S | P | A | I | V | P | S | A | V | I | H | Q | L | S | V | Y | K | P | K | D | I | V | D | P | A | T | P | Y | P | G | D | K | V | I | I | T | E | G | A | F | E | G | F | Q | A | I | F | T | E | P | D | G | E | A | R | S | M | L | L | L | N |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . |
|
|   |   |   |
|
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
E | A | P | T | F | S | I | T | G | E | E | V | H | H | I | V | N | V | . |
. |
. |
. |
. |
. |
. |
. |
X | R | X | N | E | G | D | Q | I | I | C | C | S | Q | D | G | F | E | A | K | C | E | L | Q | S | V | S | K | D | K | V | S | C | L | V | I | E |
Template Known Secondary structure |   |
S | S | S | S |  |  |  |  | S |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | T |
|
|
| T | T |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|