Job Description P51020 Confidence 89.51% Date Thu Jan 5 12:04:49 GMT 2012 Rank 196 Aligned Residues 194 % Identity 14% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	L	L	L	P	G	I	G	T	.	.	.	.	.	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	.	.	.	.	.	.	.	.	.	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D
Query Conservation																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	G	L	R	D	I	L	N	A	H	G	R	P	I	F	F	G	V	V	K	P	N	I	G	L	S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E
Template Known Secondary structure										T			S	S								S	S		S	S																T	T		S						T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200	.
Predicted Secondary structure																																				.																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	.	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	.	.	.	.	.	.	.	.	.	.	H	N
Query Conservation																																				.																																		.	.	.	.	.	.	.	.	.	.
Alig confidence											.																									.					.	.	.	.	.	.	.												.	.					.	.				.	.	.	.	.	.	.	.	.	.
Template Conservation											.																														.	.	.	.	.	.	.												.	.					.	.
Template Sequence		P	K	I	Y	L	A	N	I	T	.	D	E	V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	P	V	G	.	.	.	.	.	.	.	L	S	A	V	R	M	L	S	N	Y	T	.	.	Q	V	P	L	.	.	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K
Template Known Secondary structure											.			G	G	G												T													.	.	.	.	.	.	.												.	.	S	S			.	.					T	T	T						S	T	T
Template Predicted Secondary structure											.																														.	.	.	.	.	.	.												.	.					.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270	.	.	.	.	.	.	.	.	.	280			.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	S	L	G	V	A	N	S	I	A	A	V	E	.	E	G	C	D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	P	L	Q	D	R	P	V	R	V	D	R	E	T	L
Query Conservation															.
Alig confidence															.										.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	.	.	G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	M	G	R	I	K	P	C	L
Template Known Secondary structure		S	S														T		S						.	.		S	S	T	T	S	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T
Template Predicted Secondary structure																									.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.																									.	.	.	.	.	.	350	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	Y	A	G	V	Y	S	S	F	L	R	H	C	E	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K
Template Known Secondary structure							S	B		T	T	T
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions