Job Description P51020 Confidence 90.30% Date Thu Jan 5 12:04:49 GMT 2012 Rank 190 Aligned Residues 204 % Identity 15% Template d1wdda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.35

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	L	L	L	P	G	I	G	T	.	.	.	.	.	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	.	.	.	.	.	.	.	.	.	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D
Query Conservation																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.																.								.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		I	Q	V	E	R	D	K	L	N	K	Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	C	Y	E	C	L	R	G	G	L	D	F	T	.	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	V	F	C	A	E	A	I	Y	K	S	Q	A	E	T	G	E
Template Known Secondary structure										T			S	S								S	S	S	S																	T	T		S	B		.			T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure																																																.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.
Predicted Secondary structure																																				.																																	.	.	.	.	.	.	.	.
Query SS confidence																																				.																																	.	.	.	.	.	.	.	.
Query Sequence		T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	.	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	.	.	.	.	.	.	.	.	H	H	N	L	S
Query Conservation																																				.																																	.	.	.	.	.	.	.	.
Alig confidence																																				.																			.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.
Template Sequence		I	K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	I	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	.	.	.	.	.	.	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	K	N	H	G
Template Known Secondary structure				B								S	S															T		S																									.	.	.	.	.	.	T								T	T						S		S	S	S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.											.	.	.	270	.	.
Predicted Secondary structure													.																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	V	A	N	S	I	A	A	V	E	.	E	G	C	D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	.	.	.	.	.	.	.	.	.	.	P	L	Q	D	R	P
Query Conservation													.																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence													.												.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	I	H	A	G	T	V	.	V	G	K	L	E	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	M	T	L	G	F	V	D	L	L	R	D	D	F	I	E	K	D	R	A	R	G	I	F	F	T	Q	D
Template Known Secondary structure																	S							S	.	S	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S					B	G	G	G	T	B		S
Template Predicted Secondary structure																									.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.																					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	V	D	R	E	T	L	A	L	G	Y	A	G	V	Y	S	S	F	L	R	H	C	E	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	V	S	M	P	G	V	I	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	T	E	I
Template Known Secondary structure			T	T										S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions