Return to main results Retrieve Phyre Job Id

Job DescriptionP51020
Confidence85.42%DateThu Jan 5 12:04:49 GMT 2012
Rank253Aligned Residues197
% Identity15%Templated1qtwa_
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like Endonuclease IV
Resolution1.02

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.
Predicted Secondary structure 



























...................
Query SS confidence 




























































. . . . . . . . . . . . . . . . . . .
Query Sequence  QIAKALDDARVDSIEVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIG. . . . . . . . . . . . . . . . . . .
Query Conservation   
   
   

  



                                            ...................
Alig confidence 















.....
















.





















...................
Template Conservation       
   
   


.....                 .       
   

              
 
 
   
     
Template Sequence  NAAIRAAEIDATAFAL. . . . . FTKNQRQWRAAPLTTQT. IDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRD
Template Known Secondary structure  TT
S
.....
SS
SS
SS




.TT

GGGB

B

TT

TT
SS
Template Predicted Secondary structure 



.....












.













Template SS confidence 















































































   16...20.........30. ........40........ .50.........60.........70.........80.........
 
   92.......100.........110..... ....120.........130......... 140.........150......
Predicted Secondary structure  .




........





......




Query SS confidence  .























. . . . . . . .























. . . . . .
















Query Sequence  . TIHDLKNAWQAGARVVRVATHCTE. . . . . . . . ADVSAQHIQYARELGMDTVGFLMM. . . . . . SHMTTPENLAKQAKLME
Query Conservation  .    
  
   
   


      ........       
  

  
  
      ......                 
Alig confidence  .























........























......
















Template Conservation       
  
  

   
                       
             

                  
   
 
Template Sequence  AFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVE
Template Known Secondary structure  TT




B
TTTS

SS





TTB

SS
S
Template Predicted Secondary structure 






























Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   157..160.........170. ........180.........190.........200.........210.........220........
Predicted Secondary structure 









........





















Query SS confidence 














. . . . . . . .
























































Query Sequence  GYGATCIYVVDSGGA. . . . . . . . MNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRIDASLAGMG
Query Conservation    


 
 
 

 
 ........  
      
  
       
 
  
 


 


 

 


  


  

 

 


Alig confidence 

..










........































............












Template Conservation    ..   
   
  
                 
      
    
  


 
   ............        
   
Template Sequence  DK. . SRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKS. . . . . . . . . . . . TFGSRVDRHHSLG
Template Known Secondary structure 
G..GGT


SST
GGG
SS............
TT





TT
Template Predicted Secondary structure 

..













............










Template SS confidence 















































































   170. ........180.........190.........200.........210.........220.. .......230.....
 
   229230.........240.........
Predicted Secondary structure 










Query SS confidence 




















Query Sequence  AGAGNAPLEVFIAAADKLGWQ
Query Conservation 




   
 

  
   
  
Alig confidence 
..

















Template Conservation   ..
 

       
      
Template Sequence  E. . GNIGHDAFRWIMQDDRFD
Template Known Secondary structure  T..SSS
ST
GGGT
Template Predicted Secondary structure 
..







Template SS confidence 




















   236 ...240.........250....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions