Job Description P51020 Confidence 85.72% Date Thu Jan 5 12:04:49 GMT 2012 Rank 248 Aligned Residues 203 % Identity 12% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	G	K	K	L	Y	I	S	D	V	T	L	R	D	G	M	H	A	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A
Query Conservation
Alig confidence																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	A	G	E	I	V	I	G	D	G	G	F	V	F	A	L	E	K	R	G	Y	.	.	H	P	E	A	V	R	Q	L	H	R	E	F	L	R	A	G	S	N	V	M	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	V	N	E	A	A	A	D	I	A	R	Q	V	A	D	E	G
Template Known Secondary structure				T	T							T	T									T		.	.																T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T
Template Predicted Secondary structure																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.																.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Query Sequence		K	I	A	T	L	L	L	P	G	I	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	.	.	D	T	V	G	F	L	M	M	S	H	M	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																								.	.
Template Conservation																																												.
Template Sequence		D	A	L	V	A	G	G	V	S	Q	T	P	S	Y	L	S	A	K	S	E	T	E	V	K	K	V	F	L	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	.	I	A	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	T	L	I	A	S	G	K	P	V	A	A	T	M	A	I	G	P	E	G	D	L
Template Known Secondary structure		T															T	T																				T	T		S			.						S													G	G	G	S	S									B	T	T	B	S	T
Template Predicted Secondary structure																																												.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	.	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.																	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		H	G	V	P	P	G	E	A	A	V	R	L	V	K	A	G	A	S	I	I	G	V	N	C	H	F	D	.	.	.	P	T	I	S	L	K	T	V	K	L	M	K	E	G	L	E	A	A	Q	L	K	A	H	L	M	S	Q	P	L	A	Y	H	T	P	D	A	N	K	Q	G	F	I	D	L	P	E	F	P	F	G
Template Known Secondary structure		T	S													T	T		S						S	S	S		.	.	.																		T	T											S	B			T	T			T	T		G	G	G	S	T	T	T	T	T	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
											204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I	D	A	S	L	A
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	N	L	G	V	R	Y	I	G	G	C	C	G
Template Known Secondary structure			G	G	G	B																	T								T	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions