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Job DescriptionP51020
Confidence94.99%DateThu Jan 5 12:04:49 GMT 2012
Rank113Aligned Residues193
% Identity15%Templated1k77a_
SCOP infoTIM beta/alpha-barrel Xylose isomerase-like Hypothetical protein YgbM (EC1530)
Resolution1.63

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  AIRHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATLLLPGIG. . . . . . .
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Template Sequence  NLSXXFTEVPFIERFAAARKAGFDAVEFL. . . . . . . . . . . . . FPYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGL
Template Known Secondary structure  TTTSSTTS
GGGT
S
S.............

TTS
TT





GGGT
S
S
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   92.......100.........110..... ....120.........130.........140....
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Query Sequence  . . . . . . . . . . . . . TIHDLKNAWQAGARVVRVATHCTE. . . . . . . . . . . . ADVSAQHIQYARELGMDTVGFLMMSHMTT. .
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Template Sequence  SALPGREHEAHADIDLALEYALALNCEQVHVXAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHY
Template Known Secondary structure  TT
TT
TT
S



B

TTS
GGGT




TTTSTTB
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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   145....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  . PENLAKQAKLMEGYGATCIYVVDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRIDAS
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Template Sequence  LFSSQYQALAIVEEVARDNVFIQLDTFHA. . QKVDGNLTHLIRDYA. GKYAHVQIAGLPD. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S

S

TT..T

TT.TS

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   154.....160.........170.........180.. .......190....... ..200.........210
 
   224.....230.........240.........
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Query Sequence  LAGMGAGAGNAPLEVFIAAADKLGWQ
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Template Sequence  RHEPDD. . GEINYPWLFRLFDEVGYQ
Template Known Secondary structure 


SSS..SSS
TT

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   211..... ...220.........230....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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