Job Description P51020 Confidence 87.43% Date Thu Jan 5 12:04:49 GMT 2012 Rank 226 Aligned Residues 204 % Identity 15% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.										.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	L	L	L	P	G	I	G	T	.	.	.	.	.	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	.	.	.	.	.	.	.	.	.	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D
Query Conservation																												.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.																.								.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		V	I	L	E	R	E	R	L	D	K	F	G	R	P	L	L	G	C	T	T	K	P	K	L	G	L	S	G	K	N	Y	G	R	V	V	Y	E	A	L	K	G	G	L	D	F	V	.	D	D	E	N	I	N	S	Q	P	F	M	R	W	R	E	R	Y	L	F	T	M	E	A	V	N	K	A	S	A	A	T	G	E
Template Known Secondary structure										T			S	S								S	S	S	S																		T		S	B		.			T	T		S	S	B	T	T	B																					T	S
Template Predicted Secondary structure																																																.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.
Query Sequence		T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	.	.	.	.	.	.	.	.	H	H	N	L	S	L
Query Conservation																																																																				.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.														.	.									.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.														.	.
Template Sequence		V	K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	V	I	G	Y	.	.	.	.	T	A	I	Q	T	M	A	K	W	A	R	D	N	.	.	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q	K	N	H	G	M
Template Known Secondary structure				B								S	S														T	T		S						G	G	G			.	.	.	.													T	.	.	T								T	T	T					S		T	T	S	S
Template Predicted Secondary structure																																									.	.	.	.														.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.											.	.	270	.	.	.
Predicted Secondary structure												.																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	A	N	S	I	A	A	V	E	.	E	G	C	D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	P	.	.	.	.	.	.	.	.	.	.	L	Q	D	R	P	V
Query Conservation												.																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence												.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation																									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	R	V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	V	.	G	K	L	E	G	D	P	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W
Template Known Secondary structure														T		S							S	S	.	S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S					B	T	T	T	T	B		S
Template Predicted Secondary structure																									.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.																					.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	R	E	T	L	A	L	G	Y	A	G	V	Y	S	S	F	L	R	H	C	E	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	Y
Template Known Secondary structure		T	T										S	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions