Job Description P51020 Confidence 96.53% Date Thu Jan 5 12:04:49 GMT 2012 Rank 73 Aligned Residues 174 % Identity 16% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.												.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.												.
Template Sequence		G	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	K	L	G	E	K	G	L	E	Y	L	R	E	A	A	D	K	Y	G	M	Y	V	V	T	E	A	L	.	.	G	E	D	D	L	P	K	V	A	E	Y	.	A
Template Known Secondary structure																T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.				.															T	T									.	.	S	G	G	G								.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.												.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.															.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.		.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																	.	.	.	.												.
Query SS confidence																																																																	.	.	.	.												.
Query Sequence		R	V	V	R	V	A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	.	.	.	.	S	G	G	A	M	N	M	S	D	I	R	.	D
Query Conservation																																																																	.	.	.	.												.
Alig confidence													.	.	.																				.	.																													.	.	.	.												.
Template Conservation													.	.	.																				.	.
Template Sequence		D	I	I	Q	I	G	A	R	N	A	Q	.	.	.	N	F	R	L	L	S	K	A	G	S	Y	N	K	P	V	L	L	K	R	.	.	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G	N	T	K	I	I	L	C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	S
Template Known Secondary structure		S						G	G	G	T	T	.	.	.									G	G	G		S							.	.		T	T																T	T											B			S		S	S	S	S	S	B			T	T
Template Predicted Secondary structure													.	.	.																				.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.
Predicted Secondary structure																			.	.	.																							.	.
Query SS confidence																			.	.	.																							.	.
Query Sequence		R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	.	.	.	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	.	.	R	I	D	A
Query Conservation																			.	.	.																							.	.
Alig confidence											.	.							.	.	.																							.	.
Template Conservation											.	.
Template Sequence		A	V	P	I	I	R	K	E	S	.	.	H	L	P	I	L	V	D	P	S	H	S	G	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V	E	V
Template Known Secondary structure										B	.	.	S	S						T	T	T	T	T			G	G	G												T		S						B
Template Predicted Secondary structure											.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions