Job Description P51020 Confidence 95.14% Date Thu Jan 5 12:04:49 GMT 2012 Rank 111 Aligned Residues 183 % Identity 16% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																													.	.																			.
Query SS confidence																																																													.	.																			.
Query Sequence		S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	.	.	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	.
Query Conservation																																																													.	.																			.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																										.	.																			.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	.	.	.	.	.	.	.	.	.	.	.	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	I	D	S	S	K	W	E	V	I	E	A	G	L	K	C
Template Known Secondary structure																T	T		S						.	.	.	.	.	.	.	.	.	.	.				T	T	S															T						T	S							S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.												.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
			102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160			.	.	.	.	.	.	.				.
Predicted Secondary structure		.																																						.	.																	.	.	.	.	.							.	.								.	.	.
Query SS confidence		.																																						.	.																	.	.	.	.	.							.	.								.	.	.
Query Sequence		.	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	.	.	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	.	.	.	.	.	M	E	G	Y	G	A	.	.	T	C	I	Y	V	V	D	.	.	.	S
Query Conservation		.																																						.	.																	.	.	.	.	.							.	.								.	.	.
Alig confidence		.																																						.	.																	.	.	.	.	.							.	.								.	.	.
Template Conservation
Template Sequence		L	Q	G	K	S	I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A
Template Known Secondary structure			S	S									S	T	T																T							S			T	T					S																			T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		169	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.													.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure									.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	A	M	N	M	S	.	.	.	.	.	.	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	.	.	.	.	.	.	.	.	.	.	.	.	S	I	A	A	V	E	E	G	C	D	R	I
Query Conservation									.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.														.						.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.						.
Template Sequence		V	A	T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	.	P	G	A	H	V	.	S	G	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G
Template Known Secondary structure			S	S	S		G	G	G	T	T																S	.	T	T				.			B	G	G	G	G	G	G	G	G	T	T																			T	T
Template Predicted Secondary structure																												.						.
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.		.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions