Job Description P51020 Confidence 100.00% Date Thu Jan 5 12:04:49 GMT 2012 Rank 9 Aligned Residues 297 % Identity 16% Template c3hpxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of mycobacterium tuberculosis leua active site2 domain 1-425 (truncation mutant delta:426-644) Resolution 2.03 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	G	K	K	L	Y	I	S	D	V	T	L	R	D	G	M	H	A	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A
Query Conservation
Alig confidence										.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	R	A	P	L	W	C	.	A	V	D	L	R	D	G	N	Q	A	L	I	D	P	M	S	P	A	R	K	R	R	M	F	D	L	L	V	R	M	G	Y	K	E	I	E	V	G	F	P	S	A	S	Q	.	.	.	.	.	.	.	.	.	.	.	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P
Template Known Secondary structure				S						.								G	G	G		S	S																		T		S							T	T	T			.	.	.	.	.	.	.	.	.	.	.												T	T		S
Template Predicted Secondary structure										.																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.															.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		K	I	A	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	.	.	.	.	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	Q	H	I	Q	Y	A	R	E	L	.	.	.	.	.	.	.	G	M	D	T	V	G
Query Conservation																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	V	T	I	Q	V	L	T	Q	C	R	P	E	L	I	E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y
Template Known Secondary structure		T	T									S												T	T	T		S																		T	T																									S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.																																.	.
Query SS confidence																										.	.	.	.	.	.																																.	.
Query Sequence		F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	.	.	.	.	.	.	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	.	.	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A
Query Conservation																										.	.	.	.	.	.																																.	.
Alig confidence																										.	.	.	.	.	.																																.	.
Template Conservation
Template Sequence		S	P	E	S	Y	T	G	T	E	L	E	Y	A	K	Q	V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	P	A	T	V	E	M	T	T	P	N	V	Y	A	D	S	I	E	W	M	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V	A
Template Known Secondary structure					T	G	G	G	S																				S	S	S									S	S			S																S	T	T	G	G	G								B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		N	S	I	A	A	V	E	E	G	C	D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	.	.	.	.	P	L	Q	D	R	P	V	R	V	D	R	E	T	L	A	L	G
Query Conservation																																																													.	.	.	.
Alig confidence																																																													.	.	.	.
Template Conservation
Template Sequence		A	A	E	L	G	F	A	A	G	A	D	R	I	E	G	C	L	F	G	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	G	V	D	P	Q	I	D	F	S	N	I	D	E	I	R	R	T	V	E	Y	C	N	Q	L	P	V	H	E	R	H	P	Y	G	G	D	L	V	Y	T	A	F
Template Known Secondary structure									T	T							B	G	G	G		S	S	T	T		B		B										T	T	T				S	S			T	T													S	S				T	T		T	T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.																	.	.		.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Query Sequence		Y	A	G	V	Y	S	S	F	L	R	H	C	E	T	A	A	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	.	L	S	A	V	D	I
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Conservation
Template Sequence		S	G	S	H	Q	D	A	I	N	K	G	L	D	A	M	K	L	D	A	D	A	A	D	C	D	V	D	D	M	L	W	Q	V	P	Y	L	P	I	D	P	R	D	V
Template Known Secondary structure																							T	T			G	G	G	S					T	T		S	S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions