Job Description P51020 Confidence 85.20% Date Thu Jan 5 12:04:49 GMT 2012 Rank 258 Aligned Residues 234 % Identity 13% Template c3e49A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold; PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution Resolution 1.75 Å

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		6	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure													.																																					.
Query SS confidence													.																																					.
Query Sequence		L	Y	I	S	D	V	T	L	R	D	G	.	M	H	A	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	.	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A
Query Conservation													.																																					.
Alig confidence													.																															.						.																										.	.
Template Conservation																																												.																																.	.
Template Sequence		I	T	C	A	V	T	G	A	I	H	T	P	S	X	S	P	Y	L	P	V	T	P	D	E	V	A	Q	A	S	I	G	A	A	E	A	G	A	A	V	I	H	L	.	H	A	R	D	P	R	D	G	R	P	T	Q	D	P	A	A	F	A	E	F	L	P	R	I	K	S	N	T	D	A	V	.	.	I	N	L	T
Template Known Secondary structure							S		S	S	S		G	G	G		T	T	S			S															T		S					.					T	T	T											T	T													.	.
Template Predicted Secondary structure																																												.																																.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																																		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	G	S	P	H	X	T	V	E	E	R	L	R	P	A	T	H	Y	X	P	E	L	A	S	L	N	X	G	S	X	N	F	G	L	Y	P	X	L	E	R	F	K	E	F	A	H	G	W	E	R	E	H	L	E	R	S	R	D	L	V	F	K	N	T	F	A	D	I	E	F	I	L	K	T	C	G	G	N	G
Template Known Secondary structure		S		S		T	T	S															S							S							G	G	G	G	G	T					S	S									G	G	G	G																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.												.
Query SS confidence																																	.	.	.	.	.	.												.
Query Sequence		M	D	T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	.	.	.	.	.	.	C	I	Y	V	V	D	S	G	G	A	M	.	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S
Query Conservation																																	.	.	.	.	.	.												.
Alig confidence															.	.	.	.	.	.													.	.	.	.	.	.												.
Template Conservation															.	.	.	.	.	.
Template Sequence		T	R	F	E	F	E	C	Y	D	T	S	H	L	.	.	.	.	.	.	Y	N	L	A	H	F	V	D	R	K	L	A	T	P	P	F	F	V	Q	T	V	F	G	L	L	G	G	I	G	P	H	P	E	D	L	A	H	X	R	R	T	A	D	R	L	F	G	A	D	Y	V	W	S	I	L	G	A	G	R	H	Q
Template Known Secondary structure										S					.	.	.	.	.	.									T	T		S		S	S								S		T	T	S																				G	G	G									G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.												.						.
Query SS confidence																			.	.	.												.						.
Query Sequence		L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I	.	.	.	D	A	S	L	A	G	M	G	A	G	A	.	G	N	A	P	L	.	E	V	F	I	A	A	A	D	K	L	G	W	Q
Query Conservation																			.	.	.												.						.
Alig confidence					.														.	.	.												.						.
Template Conservation					.
Template Sequence		I	P	L	.	A	S	I	G	A	A	Q	G	A	N	V	R	V	G	L	E	D	S	L	W	I	A	P	G	E	L	A	E	T	N	A	A	Q	V	R	K	I	R	Q	V	I	E	G	L	S	L	E
Template Known Secondary structure					.						T	T	T							T	T	T		S				T	T				S																T	T
Template Predicted Secondary structure					.
Template SS confidence
		240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions