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Job DescriptionP51020
Confidence100.00%DateThu Jan 5 12:04:49 GMT 2012
Rank14Aligned Residues294
% Identity19%Templatec3dxiB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative aldolase; PDBTitle: crystal structure of the n-terminal domain of a putative2 aldolase (bvu_2661) from bacteroides vulgatus
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LYISDVTLRDGMHAIRHQYSLENVRQIAKALDDARVDSIEVAHGDGLQGSSFNYGFGAHSDLEWIEAAADVVKHAKIATL
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Template Sequence  LKILDCTLRDGGYYTNWDFNSKIVDAYILAXNELPIDYLEVGYRNKPSKEYXGKFGYTPVSVLKHLRNISTKKIAIXLNE
Template Known Secondary structure 

TTTTTT


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SS


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SG
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  LLPGIGTIHDLKNAWQAGARVVRVATHCTEADVSAQHIQYARELGMDTVGFLMMSHMTTPENLAKQAKLMEGYGATCIYV
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Template Sequence  KNTTPEDLNHLLLPIIGLVDXIRIAIDPQNIDRAIVLAKAIKTXGFEVGFNVXYXSKWAEXNGFLSKLKAIDKIADLFCX
Template Known Secondary structure  GG

GGGGGGTTT
S
GGGTT


TTSTTTGGGGGGGTTT
S
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  VDSGGAMNMSDIRDRFRALKAELKPETQTGMHAHHNLSLGVANSIAAVEEGCDRIDASLAGMGAGAGNAPLEVFIAAADK
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Template Sequence  VDSFGGITPKEVKNLLKEVRKYT. . HVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGXGRGAGNLKXELLLTYLNK
Template Known Secondary structure 
TTS



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S

B
TTS
TT
SBGGG
SSTT
B
B
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   161........170.........180... ......190.........200.........210.........220.........230........
 
   246...250.........260.........270.........280.........290.........300..
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Query Sequence  LGWQHGTDLYALMDAADDLVRPLQDRPVRVDRETLALGYAGVYSSFLRHCETAAARY
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Template Sequence  HH. GLNVDFNVLGNIITTFTPLLEKYQWGTNLPYXLSGANNIPQKEVXDWVTYSFNS
Template Known Secondary structure  S.






S

TT




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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