 |
Job Description | P51020 | Confidence | 75.13% | Date | Thu Jan 5 12:04:49 GMT 2012 |
Rank | 332 | Aligned Residues | 101 |
% Identity | 10% | Template | c3dipA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:enolase; |
PDBTitle: crystal structure of an enolase protein from the2 environmental genome shotgun sequencing of the sargasso sea
|
Resolution | 2.50 Å |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | Q | Y | S | L | E | N | V | R | Q | I | A | K | A | L | D | D | A | R | V | D | S | I | E | V | A | H | G | D | G | L | Q | G | S | S | F | N | Y | G | F | G | A | H | S | D | L | E | W | I | E | A | A | A | D | V | V | K | H | A | K | I | A | T | L | L | L | P | G | I | G | T | I | H | D | L | K | N | A | W |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
| . | . | . |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
H | S | L | W | G | T | H | A | A | A | R | I | C | N | A | L | A | D | Y | G | V | L | W | V | E | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | I | A | K | M | D | N | I | P | A | V | A | D | L | R | R | Q | T | R | A | P | . |
. |
. |
I | C | G | G | E | N | L | A | G | T | R | R | F | H | E | M | L |
Template Known Secondary structure |   |
T | T |
| B |
|  |  |  |  |  |  |  |  |  |  | G | G | G | G | T |
| S |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
| B | S |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | |
|
|
. | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
  |
  |   |
101 | . | . | |
. | . | . | . | . | . | 110 | . | . | . | . | |
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
| . |
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | G | . |
A | R | V | V | R | V | A | T | H | C | T | . |
E | A | D | V | S | A | Q | H | I | Q | Y | A | R | E | L | G | M | D | T | V | G | F | L |
Query Conservation |   |
  |   |
| . |   |   |   |
|
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|   |
Template Sequence |   |
C | A | D | A | I | D | F | V | M | L | D | L | T | W | C | G | G | L | S | E | G | R | K | I | A | A | L | A | E | T | H | A | R | P | L | A | P | H | T |
Template Known Secondary structure |   |
 | T | T |
|
| S |  |  |  |  |
| T | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|