Job Description P51020 Confidence 95.91% Date Thu Jan 5 12:04:49 GMT 2012 Rank 87 Aligned Residues 240 % Identity 11% Template c3chvA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution Resolution 1.45 Å

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		3	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		G	K	K	L	Y	I	S	D	V	.	.	.	T	L	R	D	G	M	H	A	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H
Query Conservation											.	.	.
Alig confidence											.	.	.																																				.																		.	.	.
Template Conservation																																																	.																		.	.	.
Template Sequence		N	K	P	C	I	I	C	V	A	I	T	G	S	V	P	T	K	A	D	N	P	A	V	P	I	T	V	S	E	Q	V	E	S	T	Q	E	A	F	E	A	G	A	A	I	A	H	C	.	H	V	R	N	D	D	G	T	P	S	S	D	P	D	R	F	A	.	.	.	R	L	T	E	G	L	H	T	H	C	P	G
Template Known Secondary structure					B									S	S			T	T	T		T	T				S															T							.					T	T	S											.	.	.										S	T	T
Template Predicted Secondary structure																																																	.																		.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.										.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.
Query Sequence		A	K	I	A	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	.	.	.	.	.	.	.	.	.	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K
Query Conservation																																		.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.																														.	.
Template Conservation																																																																								.	.
Template Sequence		X	I	V	Q	F	S	T	G	G	R	S	G	A	G	Q	A	R	G	G	X	L	P	L	K	P	D	X	A	S	L	S	V	G	S	N	N	F	P	S	R	V	Y	E	N	P	P	D	L	V	D	W	L	A	A	Q	X	R	S	Y	R	V	T	P	E	I	E	A	F	D	L	.	.	S	H	I	L	R	A	I	D
Template Known Secondary structure										T	T	T			G	G	G	G	G	T	T	G	G	G			S							S					S	S	S																				T								S	S		.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.
Predicted Secondary structure																																					.	.																																				.	.	.
Query SS confidence																																					.	.																																				.	.	.
Query Sequence		Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	.	.	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I	.	.	.	D	A	S	L	A
Query Conservation																																					.	.																																				.	.	.
Alig confidence																																					.	.																						.														.	.	.
Template Conservation																																																												.
Template Sequence		X	H	G	R	G	L	L	Y	G	K	L	Y	V	Q	F	V	X	G	V	K	N	A	X	P	A	D	R	E	V	F	D	F	Y	V	R	X	X	R	T	R	A	P	Q	A	E	W	C	A	A	G	I	G	A	N	Q	L	T	V	.	N	E	W	A	I	A	A	G	G	H	T	R	T	G	L	E	D	N	I	R	L
Template Known Secondary structure					T	T		S		S	S										T	T	S																				T	T	S								T	T						.							T	T						S	T	T	T			B	S
Template Predicted Secondary structure																																																												.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		226	.	.	.	230	.		.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.						.
Query SS confidence								.						.
Query Sequence		G	M	G	A	G	A	.	G	N	A	P	L	.	E	V	F	I	A	A	A	D	K	L	G	W	Q
Query Conservation								.						.
Alig confidence								.						.
Template Conservation
Template Sequence		D	R	Q	T	L	A	P	S	N	A	A	L	V	R	R	S	V	E	L	C	D	K	Y	Q	R	P
Template Known Secondary structure		S	S	S		B																		T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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