Job Description P51020 Confidence 100.00% Date Thu Jan 5 12:04:49 GMT 2012 Rank 8 Aligned Residues 328 % Identity 19% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.
Predicted Secondary structure																				.																								.	.																												.	.
Query SS confidence																				.																								.	.																												.	.
Query Sequence		N	G	K	K	L	Y	I	S	D	V	T	L	R	D	G	M	H	A	.	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	.	.	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	.	.	I	E	A	A	A	D	V
Query Conservation																				.																								.	.																												.	.
Alig confidence																				.																								.	.					.	.	.	.	.																			.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		K	Q	D	D	V	L	L	T	D	T	T	F	R	D	A	H	Q	S	L	L	A	T	R	V	R	T	K	D	M	I	N	I	A	S	K	T	A	D	V	F	K	D	G	F	S	L	E	M	.	.	.	.	.	W	G	G	A	T	F	D	V	A	Y	N	F	L	K	E	N	P	W	E	R	L	E	R	L	R	K	A
Template Known Secondary structure					S	B						T	T	T							S	T	T										T								T	T	T	S	S					.	.	.	.	.			T	T								T	S
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.						.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
		77	.	.	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Query Sequence		V	K	H	A	K	I	A	T	L	L	L	.	.	.	.	.	.	.	.	.	.	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	N	V	L	F	Q	M	L	L	R	A	S	N	A	V	G	Y	K	N	Y	P	D	N	V	I	H	K	F	V	Q	E	S	A	K	A	G	I	D	V	F	R	I	F	D	S	L	N	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	G	K	I	S	E	G	T	I	C	Y	T	G	D	I	L	N	P
Template Known Secondary structure				S	S							B	G	G	G	B	T	S	S	S																		T									T	T			G	G	G	G										T	T											S		T	T		T
Template Predicted Secondary structure
Template SS confidence
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
			139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A	V	E	E	G	C
Query Conservation		.
Alig confidence		.																																																			.	.
Template Conservation																																																					.	.
Template Sequence		E	R	S	N	I	Y	T	L	E	Y	Y	V	K	L	A	K	E	L	E	R	E	G	F	H	I	L	A	I	K	D	M	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	.	.	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y	K	Q	A	I	D	A	G	V
Template Known Secondary structure		T	T		S	S	S															T	T		S							T	T	S																T	T		.	.		S									T	T	S												T	T
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.			.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290
Predicted Secondary structure																																																			.	.	.	.	.	.																			.
Query SS confidence																																																			.	.	.	.	.	.																			.
Query Sequence		D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	.	.	.	.	.	.	P	L	Q	D	R	P	V	R	V	D	R	E	T	L	A	L	G	Y	.	A	G	V	Y	S	S
Query Conservation																																																			.	.	.	.	.	.																			.
Alig confidence																																																			.	.	.	.	.	.																			.
Template Conservation
Template Sequence		D	I	I	D	T	A	V	A	S	M	S	G	L	T	S	Q	P	S	A	N	S	L	Y	Y	A	L	N	G	F	P	R	H	L	R	T	D	I	E	G	M	E	S	L	S	H	Y	W	S	T	V	R	T	Y	Y	S	D	F	E	S	D	I	K	S	P	N	T	E	I	Y	Q	H	E	M	P	G	G	Q	Y	S	N
Template Known Secondary structure							B		G	G	G		S	T	T	S			B								T	T	T	S	S	S		B		S																		T	T	G	G	G			S			S			T	T
Template Predicted Secondary structure
Template SS confidence
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		F	L	R	H	C	E	T	A	A	A	R	Y	G	L	S	A	.	.	.	.	.	V	D	I	L	V	E	L	G	K	R	R	M	V	G	G	Q	E	D	M	I	V	D	V	A	L	D	L	R	N	N
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		L	S	Q	Q	A	K	S	L	G	L	G	E	R	F	D	E	V	K	D	M	Y	R	R	V	N	F	L	F	G	D	I	V	K	V	T	P	S	S	K	V	V	G	D	M	A	L	Y	M	V	Q	N
Template Known Secondary structure									T	T	T	S	S	T															T	T	S					T	T															T
Template Predicted Secondary structure
Template SS confidence
		874	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions