Job Description P51020 Confidence 100.00% Date Thu Jan 5 12:04:49 GMT 2012 Rank 6 Aligned Residues 287 % Identity 19% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	Y	I	S	D	V	T	L	R	D	G	M	H	A	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	W	K	I	I	D	S	T	L	R	E	G	E	Q	F	E	K	A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	T	P	.	.	.	.	.	.	.	.	.	.	.	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V
Template Known Secondary structure												T	G	G	G	G	S	T	T																			T		S							G	.	.	.	.	.	.	.	.	.	.	.	G	G														S			S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.												.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.																.	.
Query SS confidence																																		.	.	.	.	.	.	.																.	.
Query Sequence		T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	.	.	.	.	.	.	.	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	.	.	M	D	T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L
Query Conservation																																		.	.	.	.	.	.	.																.	.
Alig confidence						.	.	.																										.	.	.	.	.	.	.																.	.																								.
Template Conservation						.	.	.																																																																									.
Template Sequence		T	H	I	Q	.	.	.	C	R	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V	Y	E	.
Template Known Secondary structure						.	.	.	S											T	T		S								S																									T	T	S							S	S	T	T	T	S											.
Template Predicted Secondary structure						.	.	.																																																																									.
Template SS confidence
		71	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V	D	T	T	I	L	G	I	G	E	R	N	G	I	T
Template Known Secondary structure				G	G	G		S							T	T	S																			T	T	T	S							B		T	T	S												T	T							B	G	G	G		S	S	T	T		B
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		235	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.
Predicted Secondary structure														.	.	.																					.	.	.	.																																	.	.	.	.
Query SS confidence														.	.	.																					.	.	.	.																																	.	.	.	.
Query Sequence		P	L	E	V	F	I	A	A	A	D	K	L	.	.	.	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	.	.	.	.	P	L	Q	D	R	P	V	R	V	D	R	E	T	L	A	L	G	Y	A	G	V	Y	S	S	F	L	R	H	C	E	T	A	.	.	.	.	A	A	R	Y	G
Query Conservation														.	.	.																					.	.	.	.																																	.	.	.	.
Alig confidence														.	.	.																					.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		P	L	G	G	F	L	A	R	M	Y	T	L	Q	P	E	Y	V	R	R	K	Y	K	L	E	M	L	P	E	L	D	R	M	V	A	R	M	V	G	V	E	I	P	F	N	N	Y	I	T	G	E	T	A	F	S	H	K	A	G	M	H	L	K	A	I	Y	I	N	P	E	A	Y	E	P	Y	P	P	E	V	F	G
Template Known Secondary structure		B																				S		G	G	G													T					T	T		T	T	T	S	T	T	T	T												T	T		G	G	G	G		S	S		T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		304	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		313	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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