Job Description P51020 Confidence 82.61% Date Thu Jan 5 12:04:49 GMT 2012 Rank 281 Aligned Residues 185 % Identity 18% Template c2vefB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dihydropteroate synthase; PDBTitle: dihydropteroate synthase from streptococcus pneumoniae Resolution 1.8 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A
Query Conservation
Alig confidence																											.	.	.	.	.					.	.	.	.																					.
Template Conservation																											.	.	.	.	.					.	.	.	.																					.
Template Sequence		N	V	T	L	E	Q	A	L	Q	Q	A	R	K	L	I	A	E	G	A	S	M	L	D	I	G	.	.	.	.	.	G	E	S	Y	.	.	.	.	V	E	I	E	E	E	I	Q	R	V	V	P	V	I	K	A	I	R	K	E	.	S	D	V	L	I	S	I	D	T	W	K	S	Q	V	A	E	A	A	L	A	A
Template Known Secondary structure																			T		S						.	.	.	.	.					.	.	.	.																					.										S											T
Template Predicted Secondary structure																											.	.	.	.	.					.	.	.	.																					.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.						.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.																															.	.	.	.	.	150	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	M	S	H	M	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	N	L	A	K	Q	A
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.
Template Sequence		G	A	D	L	V	N	D	I	T	G	L	M	G	D	E	K	M	P	H	.	.	.	V	V	A	E	A	R	A	Q	V	V	I	M	F	N	P	V	M	A	R	P	Q	H	P	S	S	L	I	F	P	H	F	G	F	T	E	E	E	L	A	D	F	E	T	L	P	I	E	E	L	M	E	A	F	F	E	R	A	L
Template Known Secondary structure		T							T	T	T	T		S		T	T				.	.	.						T														T	T		G	G	G	T	T	S														T	T	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		153	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure										.	.													.														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.													.														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	M	E	G	Y	G	A	.	.	T	C	I	Y	V	V	D	S	G	G	A	M	.	N	M	S	D	I	R	D	R	F	R	A	L	K	.	.	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.	.													.														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.													.														.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	A	A	E	A	G	I	A	P	E	N	I	L	L	D	P	G	I	G	F	G	L	T	K	K	E	N	L	L	L	L	R	D	L	D	K	L	H	Q	K	G	Y	P	I	F	L	G	V	S	R	K	R	F	V	I	N	I	L	E	E	N	G	F	E	V	N	P	E	T	E	L	G	F	R	N	R	D	T	A
Template Known Secondary structure								T			G	G	G							T	T	S	S												T						T	T	S	S		B					S	S											T	T					T	T	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
			206	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		S	A	H	V	T	S	I	A	A	R	Q	G	V	E	V	V
Template Known Secondary structure												T	T		S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions