Job Description P51020 Confidence 53.65% Date Thu Jan 5 12:04:49 GMT 2012 Rank 465 Aligned Residues 193 % Identity 12% Template c2qw5B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase-like tim barrel; PDBTitle: crystal structure of a putative sugar phosphate isomerase/epimerase2 (ava4194) from anabaena variabilis atcc 29413 at 1.78 a resolution Resolution 1.78 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																																					.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	.	.	V	K	H	A	K	I	A	T	L	L	L	P	G	I	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.																										.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		R	R	I	V	V	A	H	I	K	K	L	Q	R	F	G	Y	S	G	F	E	F	P	.	.	.	.	I	A	P	G	L	P	E	N	Y	A	Q	D	L	E	N	Y	T	N	L	R	H	Y	L	D	S	E	G	L	E	N	V	K	I	S	T	N	V	G	A	T	R	T	F	D	P	S	S	N	Y	P	E	Q	R	Q
Template Known Secondary structure															T	T								.	.	.	.						G	G	G																		T	T	T	T	T											S	S	S		T	T		S	S
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
							92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																													.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M
Query Conservation		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	L	E	Y	L	K	S	R	V	D	I	T	A	A	L	G	G	E	I	X	X	G	P	I	V	I	P	Y	G	V	F	P	T	T	D	F	N	E	P	I	W	S	D	E	L	Q	E	H	L	K	V	R	Y	A	N	A	Q	P	I	L	D	K	L	G	E	Y	A	E	I	K	K	V	K	L	A	I	E	P	I
Template Known Secondary structure																	T	T		S							S	S		T	T				B		T	T			B																															T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		139	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure								.																					.					.	.	.	.
Query SS confidence								.																					.					.	.	.	.
Query Sequence		M	S	H	M	T	T	.	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	.	V	V	D	S	.	.	.	.	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A
Query Conservation								.																					.					.	.	.	.
Alig confidence								.																					.					.	.	.	.																				.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	H	W	E	T	P	G	P	N	K	L	S	Q	L	I	E	F	L	K	G	V	K	S	K	Q	V	G	V	V	I	D	S	A	H	E	I	L	D	G	E	G	P	E	I	F	K	T	Q	V	E	Y	L	A	Q	Q	.	.	.	G	R	L	H	Y	V	Q	V	S	P	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	T		S	S			S										T				T	T																														T	.	.	.	T										T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	G	C	D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	R	G	A	L	H	T	S	W	L	P	W	K	S	F	L	T	P	I	V	K	V	.	Y	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	S	S		S	S	S	S															.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
														251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions