Job Description P51020 Confidence 84.90% Date Thu Jan 5 12:04:49 GMT 2012 Rank 260 Aligned Residues 138 % Identity 12% Template c2qgqF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:protein tm_1862; PDBTitle: crystal structure of tm_1862 from thermotoga maritima.2 northeast structural genomics consortium target vr77 Resolution 2.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.																				.
Query SS confidence																																													.	.	.																				.
Query Sequence		Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	.	.	.	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	.	L	L	L	P	G	I	G	T	I	H	D	L	K	N
Query Conservation																																													.	.	.																				.
Alig confidence																											.	.	.	.	.														.	.	.																				.
Template Conservation																											.	.	.	.	.
Template Sequence		S	R	S	I	E	D	I	T	R	E	V	E	D	L	L	K	E	G	K	K	E	I	I	L	V	.	.	.	.	.	A	Q	D	T	T	S	Y	G	I	D	L	Y	R	K	Q	A	L	P	D	L	L	R	R	L	N	S	L	N	G	E	F	W	I	R	V	X	Y	L	H	P	D	H	L	T	E	E	I	I	S	A
Template Known Secondary structure		B																T	T								.	.	.	.	.		S		G	G	G	T	T	T	T	T	T	S	S												T	S	S	S	S										G	G	G
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		99	100	.	.	.			.	.	.	.	.	.	110	.	.	.													.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure							.	.											.	.	.	.	.	.	.	.	.	.	.	.																	.	.													.
Query SS confidence							.	.											.	.	.	.	.	.	.	.	.	.	.	.																	.	.													.
Query Sequence		A	W	Q	A	G	.	.	A	R	V	V	R	V	A	T	H	C	.	.	.	.	.	.	.	.	.	.	.	.	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	.	.	G	M	D	T	V	G	F	L	M	M	S	H	.	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T
Query Conservation							.	.											.	.	.	.	.	.	.	.	.	.	.	.																	.	.													.
Alig confidence							.	.											.	.	.	.	.	.	.	.	.	.	.	.																	.	.													.
Template Conservation
Template Sequence		X	L	E	L	D	K	V	V	K	Y	F	D	V	P	V	Q	H	G	S	D	K	I	L	K	L	X	G	R	T	K	S	S	E	E	L	K	K	X	L	S	S	I	R	E	R	F	P	D	A	V	L	R	T	S	I	I	V	G	F	P	G	E	T	E	E	D	F	E	E	L	K	Q	F	V	E	E	I	Q	F	D
Template Known Secondary structure						T	T	B		S							B		S									T			S																	T	T										S		T	T																			S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		162	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	Y	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	G	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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