Job Description P51020 Confidence 58.91% Date Thu Jan 5 12:04:49 GMT 2012 Rank 424 Aligned Residues 141 % Identity 15% Template c2pljA_ PDB info PDB header:lyase Chain: A: PDB Molecule:lysine/ornithine decarboxylase; PDBTitle: crystal structure of lysine/ornithine decarboxylase complexed with2 putrescine from vibrio vulnificus Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V
Query Conservation
Alig confidence														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		P	V	V	V	R	T	L	L	A	E	G	A	.	S	F	D	L	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	E	V	E	L	V	A	S	E	G	V	P	A	D	L	T	I	H	T	H	P	I	K	.	R	D	A	D	I	R	D	A	L	A	Y	G	C	N	V	F	V	V
Template Known Secondary structure												T		.						S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T			G	G	G						S	S		.												T
Template Predicted Secondary structure														.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.																			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.										.	.	.	.	.	.	180
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.
Query Sequence		A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	.	.	.	.	.	.	.	.	.	M	S	D	I	R	D	R
Query Conservation																																																																		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	D	N	L	N	E	L	E	K	F	K	A	Y	R	D	D	V	E	L	L	V	R	L	S	F	S	K	K	F	G	C	S	P	E	Q	A	L	V	I	I	E	T	A	K	E	W	N	I	R	I	K	G	L	S	F	H	V	G	S	Q	T	T	N	P	N	K	Y	V	E	A	I	H	T	C	R	H	V
Template Known Secondary structure		.	.	.	.		S						T	T	G	G	G	T	T	T							B						S		B															T	T												T	T				T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	A	L	K	A	E	L	K	P	E	T	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	E	Q	V	V	E	R	G	L	P	A	L	S	T
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions