Job Description P51020 Confidence 92.59% Date Thu Jan 5 12:04:49 GMT 2012 Rank 151 Aligned Residues 208 % Identity 13% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.										.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I	A	T	L	L	L	.	.	.	.	.	.	.	.	.	P	G	I	G	T	I	H	D
Query Conservation																																																																	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.				.																													.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.				.
Template Sequence		S	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	.	.	.	.	.	.	.	.	.	R	L	D	.	W	L	K	D	F	N	P	L	E	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E	G	D	E	N	E	R	R	D	V
Template Known Secondary structure		S															T		S					.	.	.	.	.	.	.	.	.		G	G	.	G		S	S															S	S								B	G	G	G	T	S	S	B		S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.				.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.										.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	M	S	H	M	T	T	.	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M
Query Conservation																																																			.
Alig confidence																.	.																																		.																										.	.
Template Conservation																.	.																																																												.	.
Template Sequence		L	R	L	A	M	E	L	G	A	D	Y	I	D	V	.	.	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D	I	V	K	I	A	T	T	A	.	.	V	D	I
Template Known Secondary structure								T	T		S					.	.												T	T	T				S	S										S	S																		T	T		S									.	.	S	S	G
Template Predicted Secondary structure																.	.																																																												.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I	D	A	S	L	A	.	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G
Query Conservation																																																					.
Alig confidence																									.	.	.	.	.																								.
Template Conservation																									.	.	.	.	.
Template Sequence		A	D	V	A	R	M	F	H	I	T	S	K	A	Q	V	P	T	I	G	L	V	M	G	.	.	.	.	.	E	R	G	L	M	S	R	I	L	C	S	K	F	G	G	Y	L	T	F	G	T	L	D	S	S	K	V	S	A	P	G	Q	P	T	I	K	D	L	L	D	L	Y	N	F	R	R	I	G	P	D
Template Known Secondary structure		G	G												S	S								S	.	.	.	.	.	G	G	G							T	T	T	T	T		S					B	S	S	T	T			S	S	T	T			B							T	S		G	G	G			T	T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions