 |
Job Description | P51020 | Confidence | 92.48% | Date | Thu Jan 5 12:04:49 GMT 2012 |
Rank | 153 | Aligned Residues | 104 |
% Identity | 11% | Template | c2gl5A_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: A: PDB Molecule:putative dehydratase protein; |
PDBTitle: crystal structure of putative dehydratase from salmonella thyphimurium
|
Resolution | 1.60 Å |
|
 |
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | H | Q | Y | S | L | E | N | V | R | Q | I | A | K | A | L | D | D | A | R | V | D | S | I | E | V | A | H | G | D | G | L | Q | G | S | S | F | N | Y | G | F | G | A | H | S | D | L | E | W | I | E | A | A | A | D | V | V | K | H | A | K | I | A | T | L | L | L | P | G | I | G | T | I | H | D | L | K | N | A | W |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   | . | . | . |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
H | S | L | L | G | T | N | S | A | I | Q | F | A | K | A | I | E | K | Y | R | I | F | L | Y | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | P | I | H | P | L | N | S | D | N | M | Q | K | V | S | R | S | T | T | . |
. |
. |
I | P | I | A | T | G | E | R | S | Y | T | R | W | G | Y | R | E | L | L |
Template Known Secondary structure |   |
T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |
| S | . | . | . | S |
|  |  |  |
| T | T |
|
| T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | |
|
|
. | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
  |
  |   |
101 | . | . | |
. | . | . | . | . | . | 110 | . | . | . | . | |
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
 |
|
| . |
|
|  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | G | . |
A | R | V | V | R | V | A | T | H | C | T | . |
E | A | D | V | S | A | Q | H | I | Q | Y | A | R | E | L | G | M | D | T | V | G | F | L | M | M | S | H |
Query Conservation |   |
  |   |
| . |   |   |   |
|
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
E | K | Q | S | I | A | V | A | Q | P | D | L | C | L | C | G | G | I | T | E | G | K | K | I | C | D | Y | A | N | I | Y | D | T | T | V | Q | V | H | V | C | G | G | P |
Template Known Secondary structure |   |
 | T | T |
|
| S |  |  |
|
|
| T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |
|
|
|
|
| S | S |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
287 | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|