Job Description P51020 Confidence 100.00% Date Thu Jan 5 12:04:49 GMT 2012 Rank 17 Aligned Residues 257 % Identity 21% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	K	L	Y	I	S	D	V	T	L	R	D	G	M	H	A	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I
Query Conservation
Alig confidence																																																						.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		A	E	H	V	E	I	V	E	X	A	A	R	D	G	L	Q	N	E	K	R	F	V	P	T	A	D	K	I	A	L	I	N	R	L	S	D	C	G	Y	A	R	I	E	A	T	S	F	V	S	P	K	W	.	.	.	.	.	.	V	P	Q	L	A	D	S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y
Template Known Secondary structure				B							T	T	T					T	S	S	S															T	T	T	T		S								S		T	T	T	.	.	.	.	.	.		G	G	G	T	T								S				S	S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.															.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		A	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	M	S	.	.	.	.	.	.	H	M
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence					.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		S	V	L	.	.	.	.	V	P	N	X	K	G	Y	E	A	A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P
Template Known Secondary structure					.	.	.	.		S	S										T	T		S								S									T	S	S																			T	T										S	S			T	T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		76	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I	D	A
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L	G	C	H	E	V	S	L	G	D	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	.	P	A	H	S	L	A	G	H	Y	H	D	T	G	G	R	A	L	D	N	I	R	V	S	L	E	K	G	L	R	V	F	D	A
Template Known Secondary structure																		T		S							T	T	S																T	T	S	.		G	G	G						B		T	T	S													T
Template Predicted Secondary structure																																																.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		223	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		S	L	A	G	M	G	A	.	.	.	.	.	.	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	P	L	Q	D
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	G	G	L	G	G	C	P	F	A	P	G	A	K	G	N	V	D	T	V	A	V	V	E	X	L	H	E	X	G	F	E	T	G	L	D	L	D	R	L	R	S	A	G	L	F	T	Q	A	L	R	Q	D
Template Known Secondary structure		B	T	T			S		B	T	T	B	T	T	S			B		B											T	T		B
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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