Job Description P51020 Confidence 100.00% Date Thu Jan 5 12:04:49 GMT 2012 Rank 5 Aligned Residues 324 % Identity 14% Template c1sr9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of leua from mycobacterium tuberculosis Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	K	L	Y	I	S	D	V	T	L	R	D	G	M	H	A	I	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	I	E	A	A	A	D	V	V	K	H	A	K	I
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	A	P	L	W	C	A	V	D	L	R	D	G	N	Q	A	L	I	D	P	X	S	P	A	R	K	R	R	X	F	D	L	L	V	R	X	G	Y	K	E	I	E	V	G	F	P	.	.	.	.	.	.	.	.	.	.	.	S	A	S	Q	T	D	F	D	F	V	R	E	I	I	E	Q	G	A	I	P	D	D
Template Known Secondary structure			S								T	T	T					T		S	S																		T		S							T	.	.	.	.	.	.	.	.	.	.	.	T	T														T	T		S		T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.															.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.
Predicted Secondary structure																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		A	T	L	L	L	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	.	.	.	.	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	.	.	.	.	.	.	.	T	V	G	F	L
Query Conservation																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	I	Q	V	L	T	Q	C	R	P	E	L	I	E	R	T	F	Q	A	C	S	G	A	P	R	A	I	V	H	F	Y	N	S	T	S	I	L	Q	R	R	V	V	F	R	A	N	R	A	E	V	Q	A	I	A	T	D	G	A	R	K	C	V	E	Q	A	A	K	Y	P	G	T	Q	W	R	F	E	Y	S	P
Template Known Secondary structure										S													T	T		S																		T	S																									S		S	S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.																													.	.
Query SS confidence																											.	.	.	.	.	.																													.	.
Query Sequence		M	M	S	H	M	T	T	P	E	N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	.	.	.	.	.	.	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	.	.	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S
Query Conservation																											.	.	.	.	.	.																													.	.
Alig confidence																											.	.	.	.	.	.																													.	.
Template Conservation
Template Sequence		E	S	Y	T	G	T	E	L	E	Y	A	K	Q	V	C	D	A	V	G	E	V	I	A	P	T	P	E	R	P	I	I	F	N	L	P	A	T	V	E	X	T	T	P	N	V	Y	A	D	S	I	E	W	X	S	R	N	L	A	N	R	E	S	V	I	L	S	L	H	P	H	N	D	R	G	T	A	V	A	A	A
Template Known Secondary structure			T	G	G	G	S																			B	T	T	B									S	S			S																S	S	S	G	G	G								B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		I	A	A	V	E	E	G	C	D	R	I	D	A	S	L	A	G	M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	.	.	.	.	P	L	Q	D	R	P	V	R	V	D	R	E	T	L	A	L	G	Y	A
Query Conservation																																																											.	.	.	.
Alig confidence																																																											.	.	.	.
Template Conservation
Template Sequence		E	L	G	F	A	A	G	A	D	R	I	E	G	C	L	F	G	N	G	E	R	T	G	N	V	C	L	V	T	L	G	L	N	L	F	S	R	G	V	D	P	Q	I	D	F	S	N	I	D	E	I	R	R	T	V	E	Y	C	N	Q	L	P	V	H	E	R	H	P	Y	G	G	D	L	V	Y	T	A	F	S	G
Template Known Secondary structure							T	T							B	G	G	G		S	S	T	T		B		B										T	T	T				S	S			T	T													S					T	T		T	T	T	S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.																					.					.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.													.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.													.	.	.	.	.
Query Sequence		G	V	Y	S	S	F	L	R	H	C	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	.	.	.	.	A	A	R	Y	G	L	S	A	V	D	I	L	.	.	.	.	.	V	E	L	G	K	R	R	M	V	G	G	Q	E	D	M	I	V	D	V	A	L	D	L	R	N	N
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.													.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		S	H	Q	D	A	I	N	K	G	L	D	A	X	K	L	D	A	D	A	A	D	C	D	V	D	D	X	L	W	Q	V	P	Y	L	P	I	D	P	R	D	V	G	R	T	Y	E	A	V	I	K	G	G	V	A	Y	I	X	K	T	D	H	G	L	S	L	P	R	R	L	Q	I	E	F	S	Q	V	I	Q	K	I
Template Known Secondary structure																					T	T			G	G	G	S					T	T		S	S		G	G	G	G	T																																					T
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		337
Predicted Secondary structure
Query SS confidence
Query Sequence		K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		474

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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