Job Description P51020 Confidence 100.00% Date Thu Jan 5 12:04:49 GMT 2012 Rank 3 Aligned Residues 330 % Identity 18% Template c1rr2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																																		.	.
Query SS confidence																					.																																																		.	.
Query Sequence		N	G	K	K	L	Y	I	S	D	V	T	L	R	D	G	M	H	A	I	.	R	H	Q	Y	S	L	E	N	V	R	Q	I	A	K	A	L	D	D	A	R	V	D	S	I	E	V	A	H	G	D	G	L	Q	G	S	S	F	N	Y	G	F	G	A	H	S	D	L	E	W	.	.	I	E	A	A	A	D	V	V	K
Query Conservation																					.																																																		.	.
Alig confidence																					.																												.	.	.	.	.																		.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		E	P	R	E	V	G	I	T	E	L	V	L	R	D	A	H	Q	S	L	M	A	T	R	M	A	M	E	D	M	V	G	A	C	A	D	I	D	A	A	G	Y	W	S	V	E	C	W	.	.	.	.	.	G	G	A	T	Y	D	S	C	I	R	F	L	N	E	D	P	W	E	R	L	R	T	F	R	K	L	M	P
Template Known Secondary structure			S									T	T	T								T	T				G	G	G	T	G	G	G						T	S			S						.	.	.	.	.		T	T								T	S																T
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		79	80	.	.	.	.	.	.	.											.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																								.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																																								.	.
Query Sequence		H	A	K	I	A	T	L	L	L	.	.	.	.	.	.	.	.	.	.	P	G	I	G	T	I	H	D	L	K	N	A	W	Q	A	G	A	R	V	V	R	V	A	T	H	C	T	E	A	D	V	S	A	Q	H	I	Q	Y	A	R	E	L	G	M	D	T	V	G	F	L	M	M	S	H	M	.	.	T	T	P	E
Query Conservation											.	.	.	.	.	.	.	.	.	.																																																								.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Conservation
Template Sequence		N	S	R	L	Q	M	L	L	R	G	Q	N	L	L	G	Y	R	H	Y	N	D	E	V	V	D	R	F	V	D	K	S	A	E	N	G	M	D	V	F	R	V	F	D	A	M	N	D	P	R	N	M	A	H	A	M	A	A	V	K	K	A	G	K	H	A	Q	G	T	I	C	Y	T	I	S	P	V	H	T	V	E
Template Known Secondary structure		T	S								G	G	G	T	T	S	S	S																	T	T									T	T			T													T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	A	K	Q	A	K	L	M	E	G	Y	G	A	T	C	I	Y	V	V	D	S	G	G	A	M	N	M	S	D	I	R	D	R	F	R	A	L	K	A	E	L	K	P	E	T	Q	T	G	M	H	A	H	H	N	L	S	L	G	V	A	N	S	I	A	A	V	E	E	G	C	D	R	I	D	A	S	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Y	V	K	L	A	G	Q	L	L	D	M	G	A	D	S	I	A	L	K	D	M	A	A	L	L	K	P	Q	P	A	Y	D	I	I	K	A	I	K	D	T	Y	G	Q	K	T	Q	I	N	L	H	C	H	S	T	T	G	V	T	E	V	S	L	M	K	A	I	E	A	G	V	D	V	V	D	T	A	I	S	S
Template Known Secondary structure													T	T		S							T	T																					T	T								B		T	T	S												T	T		S					B		G	G
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																										.	.	.	.	.																			.
Query SS confidence																																										.	.	.	.	.																			.
Query Sequence		M	G	A	G	A	G	N	A	P	L	E	V	F	I	A	A	A	D	K	L	G	W	Q	H	G	T	D	L	Y	A	L	M	D	A	A	D	D	L	V	R	.	.	.	.	.	P	L	Q	D	R	P	V	R	V	D	R	E	T	L	A	L	G	Y	.	A	G	V	Y	S	S	F	L	R	H	C	E	T	A	A	A
Query Conservation																																										.	.	.	.	.																			.
Alig confidence																																										.	.	.	.	.																			.
Template Conservation
Template Sequence		M	S	L	G	P	G	H	N	P	T	E	S	V	A	E	M	L	E	G	T	G	Y	T	T	N	L	D	Y	D	R	L	H	K	I	R	D	H	F	K	A	I	R	P	K	Y	K	K	F	E	S	K	T	L	V	D	T	S	I	F	K	S	Q	I	P	G	G	M	L	S	N	M	E	S	Q	L	R	A	Q	G	A
Template Known Secondary structure		G		S	T	T	S	B		B							T	T	T	T	T	T																					G	G	G	G	G	G	G			S		S				T																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		301	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		R	Y	G	L	S	A	.	.	.	.	.	V	D	I	L	V	E	L	G	K	R	R	M	V	G	G	Q	E	D	M	I	V	D	V	A	L	D	L	R	N	N
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.
Template Conservation
Template Sequence		E	D	K	M	D	E	V	M	A	E	V	P	R	V	R	K	A	A	G	F	P	P	L	V	T	P	S	S	Q	I	V	G	T	Q	A	V	F	N	V	M	M
Template Known Secondary structure			T	T															T	T				S		T	T															T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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