 |
Job Description | P75750 | Confidence | 17.10% | Date | Thu Jan 5 12:13:48 GMT 2012 |
Rank | 65 | Aligned Residues | 74 |
% Identity | 8% | Template | d2o6pa1 |
SCOP info | Immunoglobulin-like beta-sandwich
| NEAT domain-like
| NEAT domain
|
Resolution | 1.50 |
|
 |
  |   |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | L | A | S | D | D | R | M | L | P | W | E | L | R | G | Y | A | P | Q | I | S | G | I | A | Q | T | N | A | T | V | T | I | S | Q | S | G | R | V | I | Y | Q | K | K | V | P | P | G | P | F | I | I | D | D | L | N | Q | S | V | Q | G | T | L | D | V | K | V | T | E | E | D | G | R | V | N | N | F | Q | V | S |
Query Conservation |   |
|   |
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |   |   |   |
|
|
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |
|   |
|   |
|
|
|   |   |
|   | . | . | . | . | . | . | . |   |
|
|
|   |
|   |
|
| . |
|
|
|   |   |
|
|
|
|   |   |   |
|   |   | . |
|
|   |
|   |
|   |   |   |
|   | . |   |
|
|
|   |
|   |   |   |
|
|
|   |
|   |
|   |
Template Sequence |   |
Y | E | V | Y | K | Y | N | T | N | D | T | S | I | A | N | D | Y | F | . |
. |
. |
. |
. |
. |
. |
N | K | P | A | K | Y | I | K | K | . |
N | G | K | L | Y | V | Q | I | T | V | N | H | S | H | W | . |
I | T | G | M | S | I | E | G | H | K | E | . |
N | I | I | S | K | N | T | A | K | D | E | R | T | S | E | F | E |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | S | S | S | B |
| G | G | G | G | G | B | . | . | . | . | . | . | . |
| S |
|  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |  | S | G | G | G | . |  |  |  |  |  |  | T | T |  |  |
| . |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
. | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |
  |   |
330 | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
A | A | S | T |
Query Conservation |   |
  |   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|   |
|
|
Template Sequence |   |
V | S | K | L |
Template Known Secondary structure |   |
 | S |
| S |
Template Predicted Secondary structure |   |
 |
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
106 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|