Email l.a.kelley@imperial.ac.uk Description P0A9Z1 Date Thu Jan 5 11:11:41 GMT 2012 Unique Job ID 47f7b866cec7e918

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2piia_ 100.0 100 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 2 d2ns1b1 100.0 67 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 3 c3mhyC_ 100.0 64 PDB header:signaling protein Chain: C: PDB Molecule:pii-like protein pz; PDBTitle: a new pii protein structure 4 d1qy7a_ 100.0 66 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 5 d1vfja_ 100.0 45 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 6 c2rd5D_ 100.0 49 PDB header:protein binding Chain: D: PDB Molecule:pii protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana 7 c3ncpD_ 100.0 56 PDB header:signaling protein Chain: D: PDB Molecule:nitrogen regulatory protein p-ii (glnb-2); PDBTitle: glnk2 from archaeoglobus fulgidus 8 d1hwua_ 100.0 71 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 9 d1ul3a_ 100.0 63 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 10 c3bzqA_ 100.0 58 PDB header:signaling protein/transcription Chain: A: PDB Molecule:nitrogen regulatory protein p-ii; PDBTitle: high resolution crystal structure of nitrogen regulatory protein2 (rv2919c) of mycobacterium tuberculosis 11 c2j9dG_ 100.0 57 PDB header:membrane transport Chain: G: PDB Molecule:hypothetical nitrogen regulatory pii-like PDBTitle: structure of glnk1 with bound effectors indicates2 regulatory mechanism for ammonia uptake 12 c3o8wA_ 100.0 56 PDB header:signaling protein Chain: A: PDB Molecule:nitrogen regulatory protein p-ii (glnb-1); PDBTitle: archaeoglobus fulgidus glnk1 13 c3l7pA_ 99.9 55 PDB header:transcription Chain: A: PDB Molecule:putative nitrogen regulatory protein pii; PDBTitle: crystal structure of smu.1657c, putative nitrogen regulatory protein2 pii from streptococcus mutans 14 d2cz4a1 99.8 17 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Prokaryotic signal transducing protein 15 c3ce8A_ 98.6 17 PDB header:unknown function Chain: A: PDB Molecule:putative pii-like nitrogen regulatory protein; PDBTitle: crystal structure of a duf3240 family protein (sbal_0098) from2 shewanella baltica os155 at 2.40 a resolution 16 c3m05A_ 98.2 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein pepe_1480; PDBTitle: the crystal structure of a functionally unknown protein2 pepe_1480 from pediococcus pentosaceus atcc 25745 17 d1o51a_ 96.7 27 Fold:Ferredoxin-like Superfamily:GlnB-like Family:DUF190/COG1993 18 c2dclB_ 95.3 30 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical upf0166 protein ph1503; PDBTitle: structure of ph1503 protein from pyrococcus horikoshii ot3 19 c2gx8B_ 90.8 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:nif3-related protein; PDBTitle: the crystal stucture of bacillus cereus protein related to nif3 20 d2gx8a1 88.5 20 Fold:NIF3 (NGG1p interacting factor 3)-like Superfamily:NIF3 (NGG1p interacting factor 3)-like Family:NIF3 (NGG1p interacting factor 3)-like 21 c3dfeA_ not modelled 86.6 26 PDB header:signaling protein Chain: A: PDB Molecule:putative pii-like signaling protein; PDBTitle: crystal structure of a putative pii-like signaling protein2 (yp_323533.1) from anabaena variabilis atcc 29413 at 2.35 a3 resolution 22 c3hluA_ not modelled 84.7 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein duf2179; PDBTitle: crystal structure of uncharacterized protein conserved in bacteria2 duf2179 from eubacterium ventriosum 23 d1nh8a2 not modelled 84.3 16 Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain 24 c2nydB_ not modelled 81.3 20 PDB header:unknown function Chain: B: PDB Molecule:upf0135 protein sa1388; PDBTitle: crystal structure of staphylococcus aureus hypothetical protein sa1388 25 c2vd3B_ not modelled 74.5 16 PDB header:transferase Chain: B: PDB Molecule:atp phosphoribosyltransferase; PDBTitle: the structure of histidine inhibited hisg from2 methanobacterium thermoautotrophicum 26 c1nh7A_ not modelled 71.1 15 PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase; PDBTitle: atp phosphoribosyltransferase (atp-prtase) from mycobacterium2 tuberculosis 27 d1h3da2 not modelled 57.0 14 Fold:Ferredoxin-like Superfamily:GlnB-like Family:ATP phosphoribosyltransferase (ATP-PRTase, HisG), regulatory C-terminal domain 28 c2cz9A_ not modelled 56.9 21 PDB header:transferase Chain: A: PDB Molecule:probable galactokinase; PDBTitle: crystal structure of galactokinase from pyrococcus horikoshi 29 c3rrkA_ not modelled 53.8 16 PDB header:proton transport Chain: A: PDB Molecule:v-type atpase 116 kda subunit; PDBTitle: crystal structure of the cytoplasmic n-terminal domain of subunit i,2 homolog of subunit a, of v-atpase 30 c2dtjA_ not modelled 53.7 13 PDB header:transferase Chain: A: PDB Molecule:aspartokinase; PDBTitle: crystal structure of regulatory subunit of aspartate kinase2 from corynebacterium glutamicum 31 c1q1kA_ not modelled 40.6 13 PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase; PDBTitle: structure of atp-phosphoribosyltransferase from e. coli complexed with2 pr-atp 32 c2hk3A_ not modelled 29.5 16 PDB header:lyase Chain: A: PDB Molecule:diphosphomevalonate decarboxylase; PDBTitle: crystal structure of mevalonate diphosphate decarboxylase2 from staphylococcus aureus (orthorhombic form) 33 c2f06B_ not modelled 24.7 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:conserved hypothetical protein; PDBTitle: crystal structure of protein bt0572 from bacteroides thetaiotaomicron 34 d1zhva2 not modelled 23.2 19 Fold:Ferredoxin-like Superfamily:ACT-like Family:Atu0741-like 35 c2zvyB_ not modelled 22.6 11 PDB header:membrane protein Chain: B: PDB Molecule:chemotaxis protein motb; PDBTitle: structure of the periplasmic domain of motb from salmonella2 (crystal form ii) 36 c2re1A_ not modelled 21.0 10 PDB header:transferase Chain: A: PDB Molecule:aspartokinase, alpha and beta subunits; PDBTitle: crystal structure of aspartokinase alpha and beta subunits 37 c2zhoB_ not modelled 20.6 15 PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of the regulatory subunit of aspartate2 kinase from thermus thermophilus (ligand free form) 38 d2hmfa2 not modelled 19.7 18 Fold:Ferredoxin-like Superfamily:ACT-like Family:Aspartokinase allosteric domain-like 39 d1v6za2 not modelled 17.3 30 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YggJ C-terminal domain-like 40 c2nuxB_ not modelled 17.0 20 PDB header:lyase Chain: B: PDB Molecule:2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate PDBTitle: 2-keto-3-deoxygluconate aldolase from sulfolobus acidocaldarius,2 native structure in p6522 at 2.5 a resolution 41 c3hulA_ not modelled 16.9 21 PDB header:transferase Chain: A: PDB Molecule:homoserine kinase; PDBTitle: structure of putative homoserine kinase thrb from listeria2 monocytogenes 42 d1w1oa1 not modelled 16.9 13 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:Cytokinin dehydrogenase 1 43 d2f06a2 not modelled 15.2 28 Fold:Ferredoxin-like Superfamily:ACT-like Family:BT0572-like 44 c3dz1A_ not modelled 14.7 17 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution 45 c3fluD_ not modelled 14.7 16 PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis 46 d2a5la1 not modelled 13.0 17 Fold:Flavodoxin-like Superfamily:Flavoproteins Family:WrbA-like 47 c3lerA_ not modelled 12.2 19 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 campylobacter jejuni subsp. jejuni nctc 11168 48 c3n2xB_ not modelled 12.1 17 PDB header:lyase Chain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate 49 d2j0wa3 not modelled 11.9 9 Fold:Ferredoxin-like Superfamily:ACT-like Family:Aspartokinase allosteric domain-like 50 c2a2cA_ not modelled 11.7 18 PDB header:transferase Chain: A: PDB Molecule:n-acetylgalactosamine kinase; PDBTitle: x-ray structure of human n-acetyl galactosamine kinase2 complexed with mg-adp and n-acetyl galactosamine 1-3 phosphate 51 d1vi2a2 not modelled 11.3 17 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 52 d1nxza2 not modelled 10.7 13 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YggJ C-terminal domain-like 53 c3pueA_ not modelled 10.6 12 PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of the complex of dhydrodipicolinate synthase from2 acinetobacter baumannii with lysine at 2.6a resolution 54 c2yxgD_ not modelled 10.6 16 PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) 55 c3b4uB_ not modelled 10.3 13 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 56 c1zr6A_ not modelled 10.2 27 PDB header:oxidoreductase Chain: A: PDB Molecule:glucooligosaccharide oxidase; PDBTitle: the crystal structure of an acremonium strictum glucooligosaccharide2 oxidase reveals a novel flavinylation 57 c1z85B_ not modelled 10.0 14 PDB header:transferase Chain: B: PDB Molecule:hypothetical protein tm1380; PDBTitle: crystal structure of a predicted rna methyltransferase (tm1380) from2 thermotoga maritima msb8 at 2.12 a resolution 58 c2gs8A_ not modelled 9.9 10 PDB header:lyase Chain: A: PDB Molecule:mevalonate pyrophosphate decarboxylase; PDBTitle: structure of mevalonate pyrophosphate decarboxylase from streptococcus2 pyogenes 59 d1mwza_ not modelled 9.8 19 Fold:Ferredoxin-like Superfamily:HMA, heavy metal-associated domain Family:HMA, heavy metal-associated domain 60 c3mahA_ not modelled 9.7 19 PDB header:transferase Chain: A: PDB Molecule:aspartokinase; PDBTitle: a putative c-terminal regulatory domain of aspartate kinase from2 porphyromonas gingivalis w83. 61 c3lciA_ not modelled 9.7 16 PDB header:lyase Chain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w 62 d1nvta2 not modelled 9.7 33 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 63 c3cprB_ not modelled 9.5 17 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthetase; PDBTitle: the crystal structure of corynebacterium glutamicum2 dihydrodipicolinate synthase to 2.2 a resolution 64 d1x8da1 not modelled 9.4 11 Fold:Ferredoxin-like Superfamily:Dimeric alpha+beta barrel Family:YiiL-like 65 c2zodB_ not modelled 9.4 17 PDB header:transferase Chain: B: PDB Molecule:selenide, water dikinase; PDBTitle: crystal structure of selenophosphate synthetase from2 aquifex aeolicus 66 d1vhka2 not modelled 9.3 17 Fold:alpha/beta knot Superfamily:alpha/beta knot Family:YggJ C-terminal domain-like 67 d1p77a2 not modelled 9.1 21 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 68 c3nnqA_ not modelled 9.1 16 PDB header:viral protein Chain: A: PDB Molecule:n-terminal domain of moloney murine leukemia virus PDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3 69 c2qlxA_ not modelled 9.0 11 PDB header:isomerase Chain: A: PDB Molecule:l-rhamnose mutarotase; PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum in complex with l-rhamnose 70 c2qlwA_ not modelled 9.0 11 PDB header:isomerase Chain: A: PDB Molecule:rhau; PDBTitle: crystal structure of rhamnose mutarotase rhau of rhizobium2 leguminosarum 71 d1xxxa1 not modelled 9.0 12 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 72 c2cx8B_ not modelled 8.8 30 PDB header:transferase Chain: B: PDB Molecule:methyl transferase; PDBTitle: crystal structure of methyltransferase with ligand(sah) 73 d1fx0a2 not modelled 8.8 21 Fold:Domain of alpha and beta subunits of F1 ATP synthase-like Superfamily:N-terminal domain of alpha and beta subunits of F1 ATP synthase Family:N-terminal domain of alpha and beta subunits of F1 ATP synthase 74 c3mdoB_ not modelled 8.8 23 PDB header:ligase Chain: B: PDB Molecule:putative phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of a putative phosphoribosylformylglycinamidine2 cyclo-ligase (bdi_2101) from parabacteroides distasonis atcc 8503 at3 1.91 a resolution 75 d2cdqa3 not modelled 8.8 22 Fold:Ferredoxin-like Superfamily:ACT-like Family:Aspartokinase allosteric domain-like 76 c3daqB_ not modelled 8.7 12 PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from methicillin-2 resistant staphylococcus aureus 77 c2zkru_ not modelled 8.6 25 PDB header:ribosomal protein/rna Chain: U: PDB Molecule:rna expansion segment es41; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map 78 d1vqou1 not modelled 8.2 50 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:Ribosomal protein L24e 79 c3ccjU_ not modelled 8.2 50 PDB header:ribosome Chain: U: PDB Molecule:50s ribosomal protein l24e; PDBTitle: structure of anisomycin resistant 50s ribosomal subunit: 23s rrna2 mutation c2534u 80 d2i0ka2 not modelled 8.2 12 Fold:FAD-binding/transporter-associated domain-like Superfamily:FAD-binding/transporter-associated domain-like Family:FAD-linked oxidases, N-terminal domain 81 c3l76B_ not modelled 8.2 13 PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of aspartate kinase from synechocystis 82 d1nyta2 not modelled 8.1 21 Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Shikimate dehydrogenase-like 83 d1oyia_ not modelled 7.9 35 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Z-DNA binding domain 84 c1oyiA_ not modelled 7.9 35 PDB header:viral protein Chain: A: PDB Molecule:double-stranded rna-binding protein; PDBTitle: solution structure of the z-dna binding domain of the2 vaccinia virus gene e3l 85 c2l26A_ not modelled 7.7 20 PDB header:membrane protein Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922; PDBTitle: rv0899 from mycobacterium tuberculosis contains two separated domains 86 c2y3rC_ not modelled 7.7 18 PDB header:oxidoreductase Chain: C: PDB Molecule:taml; PDBTitle: structure of the tirandamycin-bound fad-dependent2 tirandamycin oxidase taml in p21 space group 87 c3n3fB_ not modelled 7.4 29 PDB header:protein binding Chain: B: PDB Molecule:collagen alpha-1(xv) chain; PDBTitle: crystal structure of the human collagen xv trimerization domain: a2 potent trimerizing unit common to multiplexin collagens 88 c3izcZ_ not modelled 7.3 50 PDB header:ribosome Chain: Z: PDB Molecule:60s ribosomal protein rpl24 (l24e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 89 c4a1eT_ not modelled 7.2 38 PDB header:ribosome Chain: T: PDB Molecule:rpl24; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna, 5.8s rrna3 and proteins of molecule 1 90 c3oonA_ not modelled 7.2 20 PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein (tpn50); PDBTitle: the structure of an outer membrance protein from borrelia burgdorferi2 b31 91 d1v7ra_ not modelled 7.1 32 Fold:Anticodon-binding domain-like Superfamily:ITPase-like Family:ITPase (Ham1) 92 d1hl2a_ not modelled 7.1 16 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 93 c2qieA_ not modelled 7.0 19 PDB header:transferase Chain: A: PDB Molecule:molybdopterin-converting factor subunit 2; PDBTitle: staphylococcus aureus molybdopterin synthase in complex2 with precursor z 94 c2ipiD_ not modelled 6.9 12 PDB header:oxidoreductase Chain: D: PDB Molecule:aclacinomycin oxidoreductase (aknox); PDBTitle: crystal structure of aclacinomycin oxidoreductase 95 d1o5ka_ not modelled 6.9 10 Fold:TIM beta/alpha-barrel Superfamily:Aldolase Family:Class I aldolase 96 c1vhkA_ not modelled 6.9 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein yqeu; PDBTitle: crystal structure of an hypothetical protein 97 d1j3ma_ not modelled 6.9 20 Fold:TBP-like Superfamily:TT1751-like Family:TT1751-like 98 d1ny5a2 not modelled 6.8 28 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Extended AAA-ATPase domain 99 d1t3ta6 not modelled 6.8 7 Fold:PurM C-terminal domain-like Superfamily:PurM C-terminal domain-like Family:PurM C-terminal domain-like