Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9Z1
Confidence7.37%DateThu Jan 5 11:11:41 GMT 2012
Rank87Aligned Residues31
% Identity29%Templatec3n3fB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:collagen alpha-1(xv) chain; PDBTitle: crystal structure of the human collagen xv trimerization domain: a2 potent trimerizing unit common to multiplexin collagens
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90......... 100.....
Predicted Secondary structure 






.



Query SS confidence 

























.





Query Sequence  VDTIIRTAQTGKIGDGKIFVFDVARV. IRIRTG
Query Conservation 
  
     
   


 


 

   .
 



Alig confidence 














.









.





Template Conservation   
 
        


.



 
  





  
Template Sequence  MDDMLQKAHLVIEGT. FIYLRDSTEFFIRVRDG
Template Known Secondary structure  T
GGGS
TT.TTTTTT
Template Predicted Secondary structure 



.




Template SS confidence 
































   910.........20... ......30.........40
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions