 |
Job Description | P0A9Z1 | Confidence | 8.18% | Date | Thu Jan 5 11:11:41 GMT 2012 |
Rank | 81 | Aligned Residues | 86 |
% Identity | 13% | Template | c3l76B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:aspartokinase; |
PDBTitle: crystal structure of aspartate kinase from synechocystis
|
Resolution | 2.54 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | K | I | D | A | I | I | K | P | F | K | L | D | D | V | R | E | A | L | A | E | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | T | G | M | T | V | T | E | V | K | G | F | G | R | Q | K | G | H | T | E | L | Y | R | G | A | E | Y | M | V | D | . |
. |
. |
. |
. |
. |
. |
. |
F | L | P | K | V | K | I | E |
Query Conservation |   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |
|
|
|   |   |   |
|   |
|
|   |   |   |   |
|
|
|   |   |
|
|
|
|
|   |   |
|
|
Template Sequence |   |
C | R | D | I | A | F | M | V | A | E | G | D | S | S | Q | A | E | A | I | L | Q | P | L | I | K | D | W | L | D | A | A | I | V | V | N | K | A | I | A | K | V | S | I | V | G | S | G | M | I | G | H | P | G | V | A | A | H | F | F | A | A | L | A | Q | E | N | I | N | I | E | M | I | A | T | S | E | I | K | I | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T | T | S | T | T |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| G | G | G | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |  |  |
| S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . |
  |
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | V | P | D | D | I | V | D | T | C | V | D | T | I | I | R | T | A | Q | T | G | K | I |
Query Conservation |   |
|
|
|   |
|
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |
|   |   |   |
Template Sequence |   |
C | V | V | P | Q | D | R | G | V | D | A | L | K | A | A | H | S | A | F | N | L | A | G | T |
Template Known Secondary structure |   |
 |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|