Return to main results Retrieve Phyre Job Id

Job DescriptionP39288
Confidence97.73%DateThu Jan 5 11:58:59 GMT 2012
Rank12Aligned Residues84
% Identity23%Templated2c42a5
SCOP infoFerredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins
Resolution1.78

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   175....180......... 190.........200.........210.........220.........230.........240.... .
Predicted Secondary structure 









..


























.......
Query SS confidence 














. .






















































. . . . . . .
Query Sequence  GELLVDIPLPVDQPV. . EEGCGKCVACMTICPTGAIVEPYTVDARRCISYLTIELEGAIPEELRPLMGNRIY. . . . . . . G
Query Conservation 
 






  
 

..   

 
  
  



 

      
   



 


  
  
   
   
  
 .......
Alig confidence 














..




















.
































.......
Template Conservation      

       
  
 
 

 

 
   

  

  .                                 
    
 
Template Sequence  TSQFEKRGVAINVPQWVPENCIQCNQCAFVCPHSAILP. VLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMG
Template Known Secondary structure 
GGGT




S
TTT





SS

.
GGGGTT

TT




SGGGTT

TTT


Template Predicted Secondary structure 

























.
































Template SS confidence 















































































   669670.........680.........690.........700...... ...710.........720.........730.........740.......
 
   246...250.........
Predicted Secondary structure 









Query SS confidence 













Query Sequence  CDDCQLICPWNRYS
Query Conservation 

 

 


 

  
Alig confidence 













Template Conservation 

 
   

    
Template Sequence  CGNCADICPPKEKA
Template Known Secondary structure 


SSSS
S
Template Predicted Secondary structure 








Template SS confidence 













   748.750.........760.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions