 |
Job Description | P39288 | Confidence | 97.36% | Date | Thu Jan 5 11:58:59 GMT 2012 |
Rank | 31 | Aligned Residues | 43 |
% Identity | 42% | Template | d1jnrb_ |
SCOP info | Ferredoxin-like
| 4Fe-4S ferredoxins
| Ferredoxin domains from multidomain proteins
|
Resolution | 1.60 |
|
 |
  |   |
190 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 200 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | G | C | G | K | C | . |
. |
. |
. |
. |
V | A | C | M | T | I | C | P | T | G | A | I | . |
. |
. |
. |
. |
. |
V | E | P | Y | T | V | D | A | R | R | C | I | S | Y | L | T | I | E | L | E | G | A | I | P | E | E | L | R | P | L | M | G | N | R | I | Y | G | C | D | D | C | Q | L | I | C | P | W | N |
Query Conservation |   |
  |   |   |
|
|   |
| . | . | . | . | . |   |   |
|   |   |
|
|
|
|   |
|
| . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
P | E | K | C | D | G | C | K | A | L | E | R | T | A | C | E | Y | I | C | P | N | D | L | M | T | L | D | K | E | K | M | K | A | Y | N | R | E | P | D | M | C | W | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | Y | S | C | V | K | M | C | P | Q | G |
Template Known Secondary structure |   |
T | T | T |
|
| S |
|
| S | S | S | S |
|  |  |  |  |  |
| T | T | S |
|  |  |  |  | T | T | T | T |  |  |  |  | S |
| G | G | G |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|