Job Description P39288 Confidence 83.00% Date Thu Jan 5 11:58:59 GMT 2012 Rank 73 Aligned Residues 53 % Identity 23% Template c1lshA_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:lipovitellin (lv-1n, lv-1c); PDBTitle: lipid-protein interactions in lipovitellin Resolution 1.90 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.								.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		I	A	V	A	L	G	N	A	P	W	D	E	T	I	L	T	A	L	E	S	R	K	G	E	H	P	.	.	.	.	.	.	.	L	L	D	E	H	I	A	W	A	I	A	Q	Q	I	E	R	R	N	A	C	I	V	E	V	Q	L	P
Query Conservation																												.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	A	L	G	N	A	G	Q	P	N	S	I	K	K	I	Q	R	F	L	P	G	Q	G	K	S	L	D	E	Y	S	T	R	V	Q	A	E	A	I	M	A	L	R	N	I	A	K	R	D	P	R	K	V	Q	E	I	V	L	P
Template Known Secondary structure										T		G	G	G						T	T	S	T	T	S	S	S					S											T	T	T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions