Job Description P39288 Confidence 98.15% Date Thu Jan 5 11:58:59 GMT 2012 Rank 2 Aligned Residues 161 % Identity 19% Template c1gx7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase Resolution UNK

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		E	E	G	C	G	K	C	V	A	C	M	T	I	C	P	T	G	A	I	.	.	.	.	.	V	E	P	Y	T	V	D	A	R	R	C	I	S	Y	L	T	I	E	L	E	G	A	I	P	E	E	L	R	P	L	M	G	N	R	I	Y	G	C	D	D	C	Q	L	I	C	P	W	N	R	Y	S	Q	L	T	T	E
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	K	C	I	G	C	D	T	C	S	Q	Y	C	P	T	A	A	I	F	G	E	M	G	E	P	H	S	I	P	H	I	E	A	C	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	Q	C	L	T	H	C	P	E	N	A	I	Y	E	A	Q	S	W
Template Known Secondary structure		T	T	S			S			S	G	G	G	G		T	T	S			B			T	T	S			B				T	T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S	T	T	S	T	T						S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.												.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query Sequence		E	D	F	S	P	R	K	P	L	H	A	P	E	L	I	E	L	F	A	W	S	E	E	K	F	L	K	V	.	.	.	.	.	.	.	.	.	.	.	T	E	G	S	A	I	R	R	I	G	H	L	R	W	L	R	N	I	A	V	A	L	G	N	A	P	W	.	.	.	.	.	D	E	T	I	L	T	A	L	E
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Alig confidence						.																								.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation						.
Template Sequence		V	P	E	V	.	E	K	K	L	K	D	G	K	V	K	C	I	A	M	P	A	P	A	V	R	Y	A	L	G	D	A	F	G	M	P	V	G	S	V	T	T	G	K	M	L	A	A	L	Q	K	L	G	F	A	H	C	W	D	T	E	F	T	A	D	V	T	I	W	E	E	G	S	E	F	V	E	R	L	T	K
Template Known Secondary structure						.						T	T	T	S															G	G	G	G	T			S	S	S		T											T	T				B																							T	T
Template Predicted Secondary structure						.
Template SS confidence
		88	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	K	G	E	H	P	L	L	D	E	H	I	A	W	A	I	A	Q	Q	I	E	R	R	N	A	C	I	V	E	V	Q	L	P	K	K	Q	R	L	V	R	V	I	E	K	G	L	P	R	D
Query Conservation
Alig confidence																.																									.	.
Template Conservation																.																									.	.
Template Sequence		K	S	D	M	P	L	P	Q	F	T	S	C	C	P	.	G	W	Q	K	Y	A	E	T	Y	Y	P	E	L	L	P	H	F	S	T	C	K	S	P	I	.	.	G	M	N	G	A	L	A	K	T
Template Known Secondary structure		S	S				S	S								.											G	G	G	G	G	G	S		S						.	.								T	T
Template Predicted Secondary structure																.																									.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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