Job Description P39288 Confidence 96.77% Date Thu Jan 5 11:58:59 GMT 2012 Rank 40 Aligned Residues 178 % Identity 11% Template c1c4cA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (fe-only hydrogenase); PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum Resolution 2.40 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	C	G	K	C	V	A	C	M	T	I	C	P	T	G	A	I	V	E	P	Y	T	V	D	A	R	R	C	I	S	Y	L	T	I	E	L	E	G	A	I	P	E	E	L	R	P	L	M	G	N	R	I	Y	G	C	D	D	C	Q	L	I	C	P	W	N	R	Y	S	Q	L	T	T	E	E	D	F	S	P	R
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.
Template Sequence		T	K	C	L	L	C	G	R	C	V	N	A	C	G	K	N	T	E	T	Y	A	M	K	F	L	N	K	N	G	K	T	I	I	G	A	E	D	E	K	C	F	D	D	T	.	.	.	.	.	.	.	N	C	L	L	C	G	Q	C	I	I	A	C	P	V	A	A	L	S	E	K	S	H	M	D	R	V	K	N	A
Template Known Secondary structure		T	S															T	S				S						T	T						S	G	G	G			G	G	G	S	.	.	.	.	.	.	.	S												S	S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		271	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.									.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.
Predicted Secondary structure					.																									.	.	.	.	.	.	.	.																							.	.															.
Query SS confidence					.																									.	.	.	.	.	.	.	.																							.	.															.
Query Sequence		K	P	L	.	H	A	P	E	L	I	E	L	F	A	W	S	E	E	K	F	L	K	V	T	E	G	S	A	.	.	.	.	.	.	.	.	I	R	R	I	G	H	L	R	W	L	R	N	I	A	V	A	L	G	N	A	P	W	.	.	D	E	T	I	L	T	A	L	E	S	R	K	G	E	.	H	P	L	L	D
Query Conservation					.																									.	.	.	.	.	.	.	.																							.	.															.
Alig confidence					.																									.	.	.	.	.	.	.	.																							.	.															.
Template Conservation
Template Sequence		L	N	A	P	E	K	H	V	I	V	A	M	A	P	S	V	R	A	S	I	G	E	L	F	N	M	G	F	G	V	D	V	T	G	K	I	Y	T	A	L	R	Q	L	G	F	D	K	I	F	D	I	N	F	G	A	D	M	T	I	M	E	E	A	T	E	L	V	Q	R	I	E	N	N	G	P	F	P	M	F	T
Template Known Secondary structure					T	T									T	T	G	G	G	T	G	G	G	G	G	T			S	S														T	T		S																									T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	I	A	W	A	I	A	Q	Q	I	E	R	R	N	A	C	I	V	E	V	Q	L	P	K	K	Q	R	L	V	R	V	I	E	K	G	L	P	R	D
Query Conservation
Alig confidence						.																									.	.
Template Conservation						.																									.	.
Template Sequence		S	C	C	P	.	G	W	V	R	Q	A	E	N	Y	Y	P	E	L	L	N	N	L	S	S	A	K	S	P	Q	.	.	Q	I	F	G	T	A	S	K	T
Template Known Secondary structure						.									T		G	G	G	T	T	T	B		S	B					.	.								T	T
Template Predicted Secondary structure						.																									.	.
Template SS confidence
		298	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions