Job Description P16916 Confidence 21.53% Date Wed Jan 25 15:20:39 GMT 2012 Rank 17 Aligned Residues 50 % Identity 26% Template c1j5qB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:major capsid protein; PDBTitle: the structure and evolution of the major capsid protein of a large,2 lipid-containing, dna virus. Resolution 2.55 Å

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		1189	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	L	P	G	Q	Q	Y	D	E	E	S	G	L	Y	Y	N	R	H	R	Y	Y	D	P	L	Q	G	R	Y	I	T	Q	D	P	I	G	L	K	G	G	W	N	F	Y	Q	Y	P	L	N	P	V	T	N	T	D	P	L	G
Query Conservation
Alig confidence																		.	.																	.	.	.	.	.															.
Template Conservation																		.	.																	.	.	.	.	.															.
Template Sequence		I	Q	L	N	G	Q	D	R	F	A	T	R	K	G	S	Y	.	.	F	N	K	V	Q	P	Y	Q	S	I	G	G	V	T	P	A	.	.	.	.	.	G	V	Y	L	Y	S	F	A	L	K	P	A	G	R	.	Q	P	S	G
Template Known Secondary structure					T	T			S	S								.	.										T		S				T	.	.	.	.	.	T						S	S	S		T	T	S	S	.	S
Template Predicted Secondary structure																		.	.																	.	.	.	.	.															.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.						350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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