Job Description P16916 Confidence 8.40% Date Wed Jan 25 15:20:39 GMT 2012 Rank 70 Aligned Residues 30 % Identity 27% Template c1bdeA_ PDB info PDB header:aids Chain: A: PDB Molecule:vpr protein; PDBTitle: helical structure of polypeptides from the c-terminal half2 of hiv-1 vpr, nmr, 20 structures Resolution UNK

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		1337	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	R	C	D	V	L	Q	E	L	I	D	C	G	D	I	S	A	K	D	A	K	S	T	Q	K	A	W	N	C	R	H	S	R
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		G	D	T	W	A	G	V	E	A	I	I	R	I	.	.	.	.	L	Q	Q	L	L	F	I	H	F	R	I	G	C	R	H	S	R
Template Known Secondary structure															.	.	.	.																S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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