Return to main results Retrieve Phyre Job Id

Job DescriptionP17445
Confidence100.00%DateThu Jan 5 11:36:12 GMT 2012
Rank38Aligned Residues461
% Identity24%Templatec3v4cB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aldehyde dehydrogenase (nadp+); PDBTitle: crystal structure of a semialdehyde dehydrogenase from sinorhizobium2 meliloti 1021
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  AEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERND
Query Conservation        
 
               
 

  
          
  

 

  
   
       
   
   
  
     
Alig confidence 















...








.


















































Template Conservation        
 
       ...     
   .            
  

 

  
   
       
   
   
  
     
Template Sequence  PKGKHLVAGEWLDGAG. . . TFASAPAHG. PAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAE
Template Known Secondary structure 



TT

SS...


SSS.





TT

T
Template Predicted Secondary structure 









...





.









Template SS confidence 















































































   5....10.........20 ......... 30.........40.........50.........60.........70.........80
 
   85....90.........100.........110.........120.........130.. .......140.........150.....
Predicted Secondary structure 









.........









Query SS confidence 















































. . . . . . . . .






















Query Sequence  ELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLRE. . . . . . . . . TSFVYTRREPLGVVAGIGAWNYP
Query Conservation   

     
 

    
   

      
                   .........         
 


  
 
 
 
Alig confidence 


















.



























.........






















Template Conservation   

     
 


   
  .

      
   
                                 
 


  
 
 
 
Template Sequence  AITEIGSQETGLPEARLNG. ERGRTTGQLRLFADHIEKGDYLDRRVDAAXPERQPAPRQEIRLVQRPVGPVAVFGASNFP
Template Known Secondary structure 


.
GGG



BTT
SSS
B


S


SS
T
Template Predicted Secondary structure 



.




























Template SS confidence 















































































   81........90......... 100.........110.........120.........130.........140.........150.........
 
   156 ...160.........170.........180.........190..... ....200.........210.........220.........
Predicted Secondary structure  ..













....













Query SS confidence 
. .






































. . . .

































Query Sequence  I. . QIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYSEA. . . . GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTG
Query Conservation   ..         

 


 

 


     

  
      
....


 


  
 
        
     
  
 


Alig confidence 
..






































....

































Template Conservation              

 


 





   
  
  
      
    


 


  
 
     
  
     
  
 


Template Sequence  LAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTG
Template Known Secondary structure  TTTSTTST



TTST

GGG




TT

S
Template Predicted Secondary structure 























Template SS confidence 















































































   160.........170.........180.........190.........200.........210.........220.........230.........
 
   230.........240...... ...250.........260.........270 .........280.........290 .........300....
Predicted Secondary structure 





.










...








.
Query SS confidence 
















.























. . .



















.













Query Sequence  GVASGKKVMANSAASSL. KEVTMELGGKSPLIVFDDADLDLA. . . ADIAMMANFFSSGQVCTNGT. RVFVPAKCKAAFEQ
Query Conservation 
   
  
   
     .  
 




    

  



  
...
  
        

 
 
  . 
 
   
 
 
  
Alig confidence 
















.























...



















.













Template Conservation 
   
  
   

          



  
 

  


   
   
  
        

 
 
    
 
   
 
 
  
Template Sequence  SLAGGRALFDLCAARPEPIPFFGELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQFCTNPGIAVVIEGADADRFTT
Template Known Secondary structure 
SSS









GGGG

TT


SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   240.........250.........260.........270.........280.........290.........300.........310.........
 
   305....310.........320.........330.........340.........350.........360.........370.........380.
Predicted Secondary structure 









































...
Query SS confidence 












































































. . .
Query Sequence  KILARVERIRAGDVFDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDM. . .
Query Conservation   
         
         



       
   
  
   

 
  

          
    



       ...
Alig confidence 











......


















...











.......

















...
Template Conservation   
          ......   

 
            ...            .......  
    



          
Template Sequence  AAVEALAKVAPQ. . . . . . TXLTDGIAKAYRDGQARFA. . . TRNAVKPLLATE. . . . . . . SSGRDASPNLFETTGAQFLAD
Template Known Secondary structure  TT


......
S
...T
TTS


.......

TT


Template Predicted Secondary structure 



......







...





.......

















Template SS confidence 















































































   320.........330. ........340.........350 .........360.. .......370.........380...
 
   382.......390.........400.........410.........420 .........430..... ....440....... ..450...
Predicted Secondary structure 













..




..







....





Query SS confidence 






































. .














. .











. . . .





Query Sequence  TIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIV. . TADLNRAHRVIHQLE. . AGICWINTWGES. . . . PAEMPV
Query Conservation      

 




 
       


   
    

 
 
 ..
 
          
 .. 
 
 

     ....    

Alig confidence 






































..














..











....





Template Conservation       
 




 
      



  

    

 
 
     
   
           
 
 

   

          
Template Sequence  HALGEEVFGPLGLVVRVGSPAEXEELARGFQGQLTATIHXDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSXVHG
Template Known Secondary structure  GGGGS

SSSSS



S

GGG
SSS
TT



STT



Template Predicted Secondary structure 




































Template SS confidence 















































































   384.....390.........400.........410.........420.........430.........440.........450.........460...
 
   454.....460..... ....470.........480......
Predicted Secondary structure 











..




Query SS confidence 











. .




















Query Sequence  GGYKHSGIGREN. . GVMTLQSYTQVKSIQVEMAKF
Query Conservation 

   

 
   ..
      

  
 
       
Alig confidence 











..




















Template Conservation 

   
        
      
 
       
   
Template Sequence  GPYPASTNFGATSVGTXSIRRFLRPVAYQNXPEDL
Template Known Secondary structure 
STTSBS
TT

SSSGGGGGGGS

GGG
Template Predicted Secondary structure 





















Template SS confidence 


































   464.....470.........480.........490........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions