Job Description P17445 Confidence 100.00% Date Thu Jan 5 11:36:12 GMT 2012 Rank 38 Aligned Residues 461 % Identity 24% Template c3v4cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:aldehyde dehydrogenase (nadp+); PDBTitle: crystal structure of a semialdehyde dehydrogenase from sinorhizobium2 meliloti 1021 Resolution 1.91 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	Q	L	Y	I	H	G	G	Y	T	S	A	T	S	G	R	T	F	E	T	I	N	P	A	N	G	N	V	L	A	T	V	Q	A	A	G	R	E	D	V	D	R	A	V	K	S	A	Q	Q	G	Q	K	I	W	A	S	M	T	A	M	E	R	S	R	I	L	R	R	A	V	D	I	L	R	E	R	N	D
Query Conservation
Alig confidence																		.	.	.										.
Template Conservation																		.	.	.										.
Template Sequence		P	K	G	K	H	L	V	A	G	E	W	L	D	G	A	G	.	.	.	T	F	A	S	A	P	A	H	G	.	P	A	H	D	F	A	V	G	T	V	E	L	V	N	R	A	C	E	A	A	E	E	A	F	W	T	Y	G	Y	S	S	R	K	E	R	A	A	F	L	R	A	I	A	D	E	I	E	A	R	A	E
Template Known Secondary structure									T	T						S	S	.	.	.							S	S	S	.																												T	T																				T
Template Predicted Secondary structure																		.	.	.										.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.										.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.
Query Sequence		E	L	A	K	L	E	T	L	D	T	G	K	A	Y	S	E	T	S	T	V	D	I	V	T	G	A	D	V	L	E	Y	Y	A	G	L	I	P	A	L	E	G	S	Q	I	P	L	R	E	.	.	.	.	.	.	.	.	.	T	S	F	V	Y	T	R	R	E	P	L	G	V	V	A	G	I	G	A	W	N	Y	P
Query Conservation																																																		.	.	.	.	.	.	.	.	.
Alig confidence																					.																													.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		A	I	T	E	I	G	S	Q	E	T	G	L	P	E	A	R	L	N	G	.	E	R	G	R	T	T	G	Q	L	R	L	F	A	D	H	I	E	K	G	D	Y	L	D	R	R	V	D	A	A	X	P	E	R	Q	P	A	P	R	Q	E	I	R	L	V	Q	R	P	V	G	P	V	A	V	F	G	A	S	N	F	P
Template Known Secondary structure																					.																				G	G	G								B	T	T		S	S	S		B											S								S	S		T
Template Predicted Secondary structure																					.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		156			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.																																								.	.	.	.
Query SS confidence			.	.																																								.	.	.	.
Query Sequence		I	.	.	Q	I	A	L	W	K	S	A	P	A	L	A	A	G	N	A	M	I	F	K	P	S	E	V	T	P	L	T	A	L	K	L	A	E	I	Y	S	E	A	.	.	.	.	G	L	P	D	G	V	F	N	V	L	P	G	V	G	A	E	T	G	Q	Y	L	T	E	H	P	G	I	A	K	V	S	F	T	G
Query Conservation			.	.																																								.	.	.	.
Alig confidence			.	.																																								.	.	.	.
Template Conservation
Template Sequence		L	A	F	S	T	A	G	G	D	T	A	A	A	L	A	A	G	C	P	V	V	V	K	G	H	S	A	H	P	G	T	G	E	I	V	A	E	A	V	D	A	A	I	R	K	T	G	V	H	P	G	V	F	S	L	I	Q	G	G	S	R	D	V	G	H	A	L	V	Q	H	P	H	I	K	A	V	G	F	T	G
Template Known Secondary structure		T	T	T	S	T	T	S										T									T	T	S																			T			G	G	G																			T	T								S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																			.																									.	.	.																					.
Query SS confidence																			.																									.	.	.																					.
Query Sequence		G	V	A	S	G	K	K	V	M	A	N	S	A	A	S	S	L	.	K	E	V	T	M	E	L	G	G	K	S	P	L	I	V	F	D	D	A	D	L	D	L	A	.	.	.	A	D	I	A	M	M	A	N	F	F	S	S	G	Q	V	C	T	N	G	T	.	R	V	F	V	P	A	K	C	K	A	A	F	E	Q
Query Conservation																			.																									.	.	.																					.
Alig confidence																			.																									.	.	.																					.
Template Conservation
Template Sequence		S	L	A	G	G	R	A	L	F	D	L	C	A	A	R	P	E	P	I	P	F	F	G	E	L	G	S	V	N	P	X	F	L	L	P	E	A	L	K	A	R	A	E	T	L	G	Q	G	W	A	G	S	L	T	X	G	A	G	Q	F	C	T	N	P	G	I	A	V	V	I	E	G	A	D	A	D	R	F	T	T
Template Known Secondary structure																S	S	S																																						G	G	G	G			T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		K	I	L	A	R	V	E	R	I	R	A	G	D	V	F	D	P	Q	T	N	F	G	P	L	V	S	F	P	H	R	D	N	V	L	R	Y	I	A	K	G	K	E	E	G	A	R	V	L	C	G	G	D	V	L	K	G	D	G	F	D	N	G	A	W	V	A	P	T	V	F	T	D	C	S	D	D	M	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence														.	.	.	.	.	.																				.	.	.													.	.	.	.	.	.	.																			.	.	.
Template Conservation														.	.	.	.	.	.																				.	.	.													.	.	.	.	.	.	.
Template Sequence		A	A	V	E	A	L	A	K	V	A	P	Q	.	.	.	.	.	.	T	X	L	T	D	G	I	A	K	A	Y	R	D	G	Q	A	R	F	A	.	.	.	T	R	N	A	V	K	P	L	L	A	T	E	.	.	.	.	.	.	.	S	S	G	R	D	A	S	P	N	L	F	E	T	T	G	A	Q	F	L	A	D
Template Known Secondary structure								T	T					.	.	.	.	.	.			S																	.	.	.	T		T	T	S								.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure														.	.	.	.	.	.																				.	.	.													.	.	.	.	.	.	.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350				.	.	.	.	.	.	.	.	.	360	.	.								.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420			.	.	.	.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.					.	.	450	.	.	.
Predicted Secondary structure																																									.	.																.	.													.	.	.	.
Query SS confidence																																									.	.																.	.													.	.	.	.
Query Sequence		T	I	V	R	E	E	I	F	G	P	V	M	S	I	L	T	Y	E	S	E	D	E	V	I	R	R	A	N	D	T	D	Y	G	L	A	A	G	I	V	.	.	T	A	D	L	N	R	A	H	R	V	I	H	Q	L	E	.	.	A	G	I	C	W	I	N	T	W	G	E	S	.	.	.	.	P	A	E	M	P	V
Query Conservation																																									.	.																.	.													.	.	.	.
Alig confidence																																									.	.																.	.													.	.	.	.
Template Conservation
Template Sequence		H	A	L	G	E	E	V	F	G	P	L	G	L	V	V	R	V	G	S	P	A	E	X	E	E	L	A	R	G	F	Q	G	Q	L	T	A	T	I	H	X	D	A	G	D	L	E	T	A	R	R	L	R	P	V	L	E	R	K	A	G	R	V	L	V	N	G	F	P	T	G	V	E	V	V	D	S	X	V	H	G
Template Known Secondary structure		G	G	G	G	S			S	S	S								S	S															S								G	G	G																S					S	S		T	T					S	T	T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		454	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		G	G	Y	K	H	S	G	I	G	R	E	N	.	.	G	V	M	T	L	Q	S	Y	T	Q	V	K	S	I	Q	V	E	M	A	K	F
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		G	P	Y	P	A	S	T	N	F	G	A	T	S	V	G	T	X	S	I	R	R	F	L	R	P	V	A	Y	Q	N	X	P	E	D	L
Template Known Secondary structure			S	T	T	S	B	S		T	T			S	S	S	G	G	G	G	G	G	G								S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.