Job Description P17445 Confidence 100.00% Date Thu Jan 5 11:36:12 GMT 2012 Rank 12 Aligned Residues 474 % Identity 33% Template c3rh9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase (nad(p)(+)); PDBTitle: the crystal structure of oxidoreductase from marinobacter aquaeolei Resolution 2.63 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	M	A	E	Q	Q	L	Y	I	H	G	G	Y	T	S	A	T	S	G	R	T	F	E	T	I	N	P	A	N	G	N	V	L	A	T	V	Q	A	A	G	R	E	D	V	D	R	A	V	K	S	A	Q	Q	G	Q	K	I	W	A	S	M	T	A	M	E	R	S	R	I	L	R	R	A	V	D	I	L	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	L	E	N	L	T	G	Y	I	G	G	R	W	K	D	S	A	G	G	A	T	F	D	V	Y	N	P	A	T	G	S	V	I	A	K	V	P	S	X	P	E	E	D	V	V	A	A	V	E	A	G	Q	S	A	L	R	L	T	N	P	W	P	I	E	T	R	R	K	W	L	E	D	I	R	D	G	L	K	E
Template Known Secondary structure		G	G	G	S			S				T	T							T	T								T	T	T																												S	S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		R	N	D	E	L	A	K	L	E	T	L	D	T	G	K	A	Y	S	E	T	S	T	V	D	I	V	T	G	A	D	V	L	E	Y	Y	A	G	L	I	P	A	L	E	G	S	Q	I	P	L	R	.	E	T	S	F	V	Y	T	R	R	E	P	L	G	V	V	A	G	I	G	A	W	N	Y	P	I	Q	I	A	L
Query Conservation																																																				.
Alig confidence																						.																														.
Template Conservation																						.
Template Sequence		N	R	E	E	I	G	R	I	L	C	X	E	H	G	K	P	W	K	E	A	.	Q	G	E	V	D	Y	A	A	G	F	F	D	Y	C	A	K	H	I	S	A	L	D	S	H	T	I	P	E	K	P	K	D	C	T	W	T	V	H	Y	R	P	V	G	V	T	G	L	I	V	P	W	N	F	P	I	G	X	I	A
Template Known Secondary structure		T																				.																		G	G	G	G						S			G	G	G												S							S	S	S	T	T
Template Predicted Secondary structure																						.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	S	A	P	A	L	A	A	G	N	A	M	I	F	K	P	S	E	V	T	P	L	T	A	L	K	L	A	E	I	Y	S	E	A	G	L	P	D	G	V	F	N	V	L	P	G	V	G	A	E	T	G	Q	Y	L	T	E	H	P	G	I	A	K	V	S	F	T	G	G	V	A	S	G	K	K	V	M	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	L	S	A	A	L	A	A	G	C	P	S	V	I	K	P	A	S	E	T	P	L	T	X	I	A	F	F	S	V	X	D	K	L	D	L	P	D	G	X	V	N	L	V	X	G	K	A	S	V	I	G	K	V	L	C	E	H	K	D	V	P	X	L	S	F	T	G	S	T	E	V	G	R	K	L	I	V	D
Template Known Secondary structure											T									T	T	S												T	T	T	T			T	T	S						S													T	T								S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	S	S	L	K	E	V	T	M	E	L	G	G	K	S	P	L	I	V	F	D	D	A	D	L	D	L	A	A	D	I	A	M	M	A	N	F	F	S	S	G	Q	V	C	T	N	G	T	R	V	F	V	P	A	K	C	K	A	A	F	E	Q	K	I	L	A	R	V	E	R	I	R	A	G	D	V	F	D
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		T	.	A	E	Q	V	K	K	L	A	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	D	L	E	A	A	A	D	N	L	I	A	N	K	F	R	G	G	G	Q	T	C	V	C	A	N	R	I	F	V	H	E	K	V	A	D	A	F	G	Q	K	L	A	E	R	V	N	K	X	T	V	G	D	G	X	N
Template Known Secondary structure		T	.	T	T	T	T																	T	T	S															G	G	G	G		S	S	S	S								T	T	T																	B	S		T	T	S
Template Predicted Secondary structure			.
Template SS confidence
		244		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	T	N	F	G	P	L	V	S	F	P	H	R	D	N	V	L	R	Y	I	A	K	G	K	E	E	G	A	R	V	L	C	G	G	D	V	L	K	G	D	G	F	D	N	G	A	W	V	A	P	T	V	F	T	D	C	S	D	D	M	T	I	V	R	E	E	I	F	G	P	V	M	S	I	L	T	Y	E	S
Query Conservation
Alig confidence																																							.	.	.
Template Conservation																																							.	.	.
Template Sequence		D	G	I	D	I	G	P	L	I	N	K	Q	G	F	D	K	V	K	R	H	L	Q	D	A	L	D	K	G	A	S	L	V	A	G	K	Q	P	.	.	.	A	E	L	G	D	G	L	F	F	P	P	T	V	V	Q	G	V	D	R	E	X	C	C	Y	Q	E	E	T	F	G	P	L	V	P	X	A	L	F	R	T
Template Known Secondary structure		T	T		S	B				S																		T	T						S			G	.	.	.	G	G			S	S	S												T	T	S					S				S	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	E	V	I	R	R	A	N	D	T	D	Y	G	L	A	A	G	I	V	T	A	D	L	N	R	A	H	R	V	I	H	Q	L	E	A	G	I	C	W	I	N	T	W	G	E	S	P	A	E	M	P	V	G	G	Y	K	H	S	G	I	G	R	E	N	G	V	M	T	L	Q	S	Y	T	Q	V	K	S	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	E	V	I	D	A	G	N	D	T	E	F	G	L	A	S	Y	V	F	T	A	D	A	E	R	A	Q	R	V	A	A	G	L	R	F	G	H	V	G	W	N	T	G	T	G	P	T	P	E	A	P	F	G	G	X	K	A	S	G	I	G	R	E	G	G	L	E	G	L	F	E	F	V	E	A	Q	T	V	P
Template Known Secondary structure										T		S	S			S							S															S					S							T	T	S		B			S	G	G	G			S		B	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.