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Job DescriptionP17445
Confidence100.00%DateThu Jan 5 11:36:12 GMT 2012
Rank36Aligned Residues450
% Identity30%Templatec3pqaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:lactaldehyde dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase gapn2 from methanocaldococcus jannaschii dsm 2661
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERNDELAKLETLDTGKAYS
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Template Sequence  NREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKILAIDAGKPIK
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TTT





TT

T


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Query Sequence  ETSTVDIVTGADVLEYYAGLIPALEGSQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSE
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Template Sequence  QARV. EVERSIGTFKLAAFYVKEH. RDEVIPSDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSS
Template Known Secondary structure  .
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TT
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Query Sequence  VTPLTALKLAEIYSEA. . . . GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMELGG
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Template Sequence  KAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKA. . . GFKKIALELGG
Template Known Secondary structure  TS
TT

GGG

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Query Sequence  KSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQTNFGPLVSFPHRD
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Template Sequence  VNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAE
Template Known Secondary structure 

TTS
GGGG
STTSGGGT

BS
TTSTT
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Query Sequence  NVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGL
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Template Sequence  WVEKVVEKAIDEGGKLLLGGK. . . . . . . RDKALFYPTIL. EVDRDNILCKTETFAPVIPIIRTNE. EEMIDIANSTEYGL
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TTSGGGT



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Query Sequence  AAGIVTADLNRAHRVIHQLEAGICWINTWGESP. AEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEM
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Template Sequence  HSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK
Template Known Secondary structure 
S
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SSSS
TT


TTS
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SGGGS
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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