Job Description P17445 Confidence 100.00% Date Thu Jan 5 11:36:12 GMT 2012 Rank 14 Aligned Residues 480 % Identity 35% Template c3k2wD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:betaine-aldehyde dehydrogenase; PDBTitle: crystal structure of betaine-aldehyde dehydrogenase from2 pseudoalteromonas atlantica t6c Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	A	E	Q	Q	L	Y	I	H	G	G	Y	T	S	A	T	S	G	R	T	F	E	T	I	N	P	A	N	G	N	V	L	A	T	V	Q	A	A	G	R	E	D	V	D	R	A	V	K	S	A	Q	Q	G	Q	K	I	W	A	S	M	T	A	M	E	R	S	R	I	L	R	R	A	V	D	I	L	R	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	F	K	N	K	V	N	F	I	G	G	Q	Y	V	P	S	N	E	S	D	T	I	D	I	L	S	P	S	T	G	K	V	I	G	E	I	P	A	G	C	K	A	D	A	E	N	A	L	E	V	A	Q	A	A	Q	K	A	W	A	K	L	T	A	R	T	R	Q	N	M	L	R	T	F	A	N	K	I	R	E	N
Template Known Secondary structure					T	T					T	T						S	S									T	T	T																																S																			T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		N	D	E	L	A	K	L	E	T	L	D	T	G	K	A	Y	S	E	T	S	T	V	D	I	V	T	G	A	D	V	L	E	Y	Y	A	G	L	I	P	A	L	E	G	S	Q	I	P	L	R	.	E	T	S	F	V	Y	T	R	R	E	P	L	G	V	V	A	G	I	G	A	W	N	Y	P	I	Q	I	A	L	W
Query Conservation																																																			.
Alig confidence																							.																												.
Template Conservation																							.
Template Sequence		K	H	I	L	A	P	M	L	V	A	E	Q	G	K	L	L	S	V	A	E	M	.	E	V	D	V	T	A	T	F	I	D	Y	G	C	D	N	A	L	T	I	E	G	D	I	L	P	S	D	N	Q	D	E	K	I	Y	I	H	K	V	P	R	G	V	V	V	G	I	T	A	W	N	F	P	L	A	L	A	G	R
Template Known Secondary structure																							.															T	T	T	T									S	S	T	T											S								S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	A	P	A	L	A	A	G	N	A	M	I	F	K	P	S	E	V	T	P	L	T	A	L	K	L	A	E	I	Y	S	E	A	G	L	P	D	G	V	F	N	V	L	P	G	V	G	A	E	T	G	Q	Y	L	T	E	H	P	G	I	A	K	V	S	F	T	G	G	V	A	S	G	K	K	V	M	A	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	G	P	A	L	I	T	G	N	T	M	V	L	K	P	T	Q	E	T	P	L	A	T	T	E	L	G	R	I	A	K	E	A	G	L	P	D	G	V	L	N	V	I	N	G	T	G	S	V	V	G	Q	T	L	C	E	S	P	I	T	K	M	I	T	M	T	G	S	T	V	A	G	K	Q	I	Y	K	T	S
Template Known Secondary structure									T	T									S	S	S														T	T			T	T	T						S		T	T	T									T	T								S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	S	L	K	E	V	T	M	E	L	G	G	K	S	P	L	I	V	F	D	D	A	D	L	D	L	A	A	D	I	A	M	M	A	N	F	F	S	S	G	Q	V	C	T	N	G	T	R	V	F	V	P	A	K	C	K	A	A	F	E	Q	K	I	L	A	R	V	E	R	I	R	A	G	D	V	F	D	P
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	E	Y	M	T	P	V	M	L	E	L	G	G	K	A	P	M	V	V	M	D	D	A	D	L	D	K	A	A	E	D	A	L	W	G	R	F	A	N	C	G	Q	V	C	T	C	V	E	R	L	Y	V	H	A	S	V	Y	D	E	F	M	A	K	F	L	P	L	V	K	G	L	K	V	G	D	P	M	D	A
Template Known Secondary structure		.	T	T	T	T																	T	T	S															G	G	G	G		S	T	T	S								G	G	G														T			B			T	T	S	T
Template Predicted Secondary structure		.
Template SS confidence
			246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	N	F	G	P	L	V	S	F	P	H	R	D	N	V	L	R	Y	I	A	K	G	K	E	E	G	A	R	V	L	C	G	G	D	V	L	K	G	D	G	F	D	N	G	A	W	V	A	P	T	V	F	T	D	C	S	D	D	M	T	I	V	R	E	E	I	F	G	P	V	M	S	I	L	T	Y	E	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	Q	M	G	P	K	C	N	Q	R	E	I	D	N	I	D	H	I	V	H	E	A	I	K	Q	G	A	T	V	A	T	G	G	K	T	A	T	V	E	G	F	E	G	G	C	W	Y	E	P	T	V	L	V	D	V	K	Q	D	N	I	V	V	H	E	E	T	F	G	P	I	L	P	I	V	K	V	S	S	M
Template Known Secondary structure		T		S	B				S																			T								S	B				T	T			S	S			B							S			T	T	S	G	G	G	T	S				S	S								S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V	I	R	R	A	N	D	T	D	Y	G	L	A	A	G	I	V	T	A	D	L	N	R	A	H	R	V	I	H	Q	L	E	A	G	I	C	W	I	N	T	W	G	E	S	P	A	E	M	P	V	G	G	Y	K	H	S	G	I	G	R	E	N	G	V	M	T	L	Q	S	Y	T	Q	V	K	S	I	Q	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	A	I	E	F	C	N	D	S	I	Y	G	L	S	A	Y	V	H	T	Q	S	F	A	N	I	N	Q	A	I	S	D	L	E	V	G	E	V	Y	I	N	R	G	M	G	E	Q	H	Q	G	F	H	N	G	W	K	Q	S	G	F	G	G	E	D	G	K	F	G	L	E	Q	Y	L	E	K	K	T	V	Y	I
Template Known Secondary structure										S	S	S			S																					S	S					S			S				T	T	S		B					T	T			S		B	S							T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		482	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		485	.	.