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Job DescriptionP17445
Confidence100.00%DateThu Jan 5 11:36:12 GMT 2012
Rank4Aligned Residues479
% Identity40%Templatec3ed6B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: 1.7 angstrom resolution crystal structure of betaine aldehyde2 dehydrogenase (betb) from staphylococcus aureus
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50......... 60.........70.........80...
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Query Sequence  EQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKI. . WASMTAMERSRILRRAVDILRERN
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Template Sequence  SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEHR
Template Known Secondary structure 

STT

TT

TTTT


TTTTTS
T
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   84.....90.........100.........110.........120.........130. ........140.........150.........160..
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Query Sequence  DELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLR. ETSFVYTRREPLGVVAGIGAWNYPIQIALWK
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Template Sequence  EALARLETLDTGKTLEESYA. DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK
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   88.90.........100....... ..110.........120.........130.........140.........150.........160......
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  SAPALAAGNAMIFKPSEVTPLTALKLAEIYSEAGLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSA
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Template Sequence  IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNA.
Template Known Secondary structure  T


TT




TTS

S

TT
TT
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   167..170.........180.........190.........200.........210.........220.........230.........240.....
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  ASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVFDPQ
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Template Sequence  ANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDAD
Template Known Secondary structure  TTT






TTS
GGGGTSTT


TT

B

TTSTT
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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  TNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESED
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Template Sequence  TEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQ
Template Known Secondary structure 
SB


S
T


S



TTTTTS




S

TTSS


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   326...330.........340.........350.........360.........370.........380.........390.........400.....
 
   403......410.........420.........430.........440.........450.........460.........470.........480..
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Query Sequence  EVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVE
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Template Sequence  EAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTN
Template Known Secondary structure  T
SS

S
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SS
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TTS
B

SGGGS
BSTT
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   406...410.........420.........430.........440.........450.........460.........470.........480.....
 
   483...
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Query Sequence  MAKF
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Template Conservation      
Template Sequence  TNPQ
Template Known Secondary structure  SS

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   486...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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