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Job DescriptionP17445
Confidence100.00%DateThu Jan 5 11:36:12 GMT 2012
Rank15Aligned Residues476
% Identity30%Templatec2jg7G_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:antiquitin; PDBTitle: crystal structure of seabream antiquitin and elucidation of2 its substrate specificity
Resolution2.83 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  AEQQLYIHGGYTSATSGRTFETINPANGNVLATVQAAGREDVDRAVKSAQQGQKIWASMTAMERSRILRRAVDILRERND
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Template Sequence  EDNPGVYNGSWG. . GSGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKMWADIPAPKRGEIVRQIGDALRKKIK
Template Known Secondary structure  S
SSS..

S
TTTT


TTS
T
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   20.........30. ........40.........50.........60.........70.........80.........90.......
 
   85....90.........100.........110.........120.........130. ........140.........150.........160...
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Query Sequence  ELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEGSQIPLR. ETSFVYTRREPLGVVAGIGAWNYPIQIALWKS
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Template Sequence  VLGSLVSLEMGKIYVEGVG. EVQEYVDVCDYAVGLSRMIGGPVLPSERPGHALIEQWNPVGLVGIITAFNFPVAVYGWNN
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.TTT




SSTT
S

SSSTT
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   98.100.........110...... ...120.........130.........140.........150.........160.........170......
 
   164.....170.........180.........190..... ....200.........210.........220.........230.........
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Query Sequence  APALAAGNAMIFKPSEVTPLTALKLAEIYSEA. . . . GLPDGVFNVLPGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMA
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Template Sequence  AIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAICSMTCG. GADIGTAMAKDERVDLLSFTGSTHVGKMVAM
Template Known Secondary structure  TT


TT
TT

GGG

.S
TT
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   177..180.........190.........200.........210.........220.... .....230.........240.........250.....
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  NSAASSLKEVTMELGGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDVF
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Template Sequence  MV. QERFGRKLLELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPW
Template Known Secondary structure  .TT





TTS
GGGG
STT
TTTTT

B

TT
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   256. ..260.........270.........280.........290.........300.........310.........320.........330....
 
   320.........330.........340.........350.........360.........370.........380.........390.........
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Query Sequence  DPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYE
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Template Sequence  DPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRP. . . . GNYVEPTIITGLAHDAPIVHTETFVPILYVLKFK
Template Known Secondary structure  STT
SB


SSTT


SB
SSS....SS
B




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   335....340.........350.........360.........370...... ...380.........390.........400.........410
 
   400.........410.........420.........430 .........440........ .450.........460.........470......
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Query Sequence  SEDEVIRRANDTDYGLAAGIVTADLNRAHRV. . IHQLEAGICWINTWGESP. AEMPVGGYKHSGIGRENGVMTLQSYTQV
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Template Sequence  TEEEAFAWNNEVQQGLSSSIFTKDLGRVFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDSWKQYMRR
Template Known Secondary structure 
SS

S


STTS

SSSS
TT


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SGGG
S

STTGGGGG
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   411........420.........430.........440.........450.........460.........470.........480.........490
 
   477..480.........
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Query Sequence  KSIQVEMAKFQSI
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Template Conservation 
 
        
 
Template Sequence  STCTINYSKDLPL
Template Known Secondary structure 
S




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   491........500...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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