Job Description P17445 Confidence 16.49% Date Thu Jan 5 11:36:12 GMT 2012 Rank 78 Aligned Residues 51 % Identity 16% Template c1l6jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:matrix metalloproteinase-9; PDBTitle: crystal structure of human matrix metalloproteinase mmp92 (gelatinase b). Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		M	S	R	M	A	E	Q	Q	L	Y	I	H	G	.	G	Y	T	S	A	T	S	G	R	T	F	E	T	I	N	P	A	N	G	N	V	L	A	T	V	Q	A	A	G	R	E	D	V	D	R	A	V	K	S	A	Q	Q	G	Q	K	I	W	A	S	M	T
Query Conservation															.
Alig confidence															.				.	.													.	.	.	.	.	.	.	.															.	.	.
Template Conservation																			.	.													.	.	.	.	.	.	.	.															.	.	.
Template Sequence		V	P	D	L	G	R	F	Q	T	F	E	G	D	L	K	W	H	.	.	H	H	N	I	T	Y	W	I	Q	N	Y	S	.	.	.	.	.	.	.	.	E	D	L	P	R	A	V	I	D	D	A	F	A	R	.	.	.	A	F	A	L	W	S	A	V	T
Template Known Secondary structure		S		S	S	S		S	S			S	S		S	S			.	.	S	S											.	.	.	.	.	.	.	.	T	T	S												.	.	.								T	S
Template Predicted Secondary structure																			.	.													.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.				.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions