Return to main results Retrieve Phyre Job Id

Job DescriptionQ47151
Confidence100.00%DateWed Jan 25 15:21:14 GMT 2012
Rank3Aligned Residues122
% Identity31%Templatec2k1gA_
PDB info PDB header:lipoproteinChain: A: PDB Molecule:lipoprotein spr; PDBTitle: solution nmr structure of lipoprotein spr from escherichia coli k12.2 northeast structural genomics target er541-37-162
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  ITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSR
Query Conservation      

  
   

 

  

  
  
 





  

    

 


 
  
   
    
      






     
Alig confidence 























.































..

















..
Template Conservation      

  
   

 

  

   . 
 





  

    
  


        
..  
       




   .. 
Template Sequence  VKSRIMDQYADWKGVRYRLGGSTK. KGIDCSGFVQRTFREQFGLELPRSTYEQQEMG. . KSVSRSNLRTGDLVLFRA. . G
Template Known Secondary structure  TT



SS

BT.TB

TT




SSGGGS..
GGG

TT..T
Template Predicted Secondary structure 









.











..












..
Template SS confidence 















































































   40.........50.........60... ......70.........80.........90..... ....100.........110... .
 
   198.200.........210.........220.........230.........240.....
Predicted Secondary structure 


















Query SS confidence 















































Query Sequence  EIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTE
Query Conservation      






 
  


      
 
  
   

  
  
 


   
Alig confidence 


















.



























Template Conservation      






 
  


 .   

 
  
   
   
  

 

   
Template Sequence  STGRHVGIYIGNNQFVHAS. TSSGVIISSMNEPYWKKRYNEARRVLSR
Template Known Secondary structure  TTTT.TTTTTS
S
S
Template Predicted Secondary structure 





.












Template SS confidence 















































   115....120.........130... ......140.........150.........160.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions