Job Description Q47151 Confidence 98.38% Date Wed Jan 25 15:21:14 GMT 2012 Rank 12 Aligned Residues 120 % Identity 19% Template c2im9A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of protein lpg0564 from legionella pneumophila str.2 philadelphia 1, pfam duf1460 Resolution 1.67 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.														140	.	.	.	.	.	.	.	.	.	150	.	.	.	.																					.	.	.	.	.	160
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	L	H	N	I	T	E	V	A	I	H	R	L	E	Q	Q	L	G	K	P	Y	V	W	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	D	K	G	F	D	C	S	G	L	V	F	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	K	I	L	E
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																																																																															.
Template Sequence		N	T	T	S	M	A	D	R	I	S	Q	I	S	A	Y	F	K	G	T	K	Y	I	L	G	S	L	G	E	G	P	N	A	R	Y	D	Q	F	P	R	Y	R	V	D	G	F	D	C	D	T	Y	V	N	T	V	L	S	L	A	L	A	N	S	L	E	S	F	Q	E	C	L	K	H	T	R	Y	K	N	.	G	K
Template Known Secondary structure		T															T	T	T		B	B		T	T				S		T	T		S	S	B		S		S	S		S	S		B																S	S													B	G	G	.	G
Template Predicted Secondary structure																																																																															.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.
		161	.	.	.				.	.	.	.		.	170	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	L	P	.	.	.	R	T	A	N	.	E	M	Y	H	Y	R	R	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	Y	I	N	R	N	H	F	T	S	I	D	W	N	N	Y	N	Q	K	R	G	L	L	K	D	I	T	F	S	I	R	N	E	K	K	Q	P	V	A	L	Y	A	N	A	L	I	N	K	P	Q	W	Y	N	H	K	T	I	D	T	I	R	L	Q	K	Q	D	K	N	E	Q	E	K	R	L	V	E	L	K	A
Template Known Secondary structure			S	T	T	T	B			S	T	T	T	T								T	T	S					G	G	G		B		T	T	S		B																	T			G	G	G		B		S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
															178	.	180															.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.			.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.													.					.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.													.					.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	D	L	R	R	G	D	L	L	F	F	H	I	H	.	.	.	.	.	.	.	.	.	S	R	E	I	A	D	H	M	G	V	Y	L	.	G	D	G	Q	.	.	F	I	E	S	P	R	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.													.					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.													.					.	.
Template Conservation
Template Sequence		K	G	K	T	L	E	T	S	L	S	N	V	P	Y	I	P	F	T	A	L	F	S	E	N	K	P	N	L	H	L	F	S	Q	I	P	N	G	A	V	I	E	I	I	R	P	N	W	D	L	R	Q	Q	I	G	T	E	L	D	I	S	H	L	G	F	A	I	W	I	N	N	E	L	F	F	R	Q	A	S	S	Q
Template Known Secondary structure				T	T																	T	G	G	G	S							T	T	S		T	T																	S	S														T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	T	I	R	I	S	R	L	A	E	P	F	W	Q	D	H
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		Y	G	K	V	V	D	V	S	L	I	D	.	Y	L	D	K	A
Template Known Secondary structure		T	T										.
Template Predicted Secondary structure													.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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