Return to main results Retrieve Phyre Job Id

Job DescriptionP60061
Confidence3.93%DateThu Jan 5 12:06:40 GMT 2012
Rank21Aligned Residues347
% Identity11%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  WIGNIAMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGET
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Template Conservation   
 
 
       
     
 
 

 


  
        
                         
             
Template Sequence  LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRT
Template Known Secondary structure  S

SSSST
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  YMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRV
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Template Conservation                                                                                  
Template Sequence  MVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYK
Template Known Secondary structure  TT
TTTTST

STT
T


SSTTT


S
TTT
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   145....150.........160.........170.........180.........190.........200.........210.........220....
 
   258.260.........270.........280.........290.........300........ .310.........
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Query Sequence  SASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDG. . . . . . . . . . . . . . . . . . LFPPIFARVNK
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Template Conservation                                                                          
 
     
Template Sequence  NDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF
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TTSS
BTTBS


TS
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   320.........330.........340.........350.........360.........370.........380.........390...... ..
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Query Sequence  AGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFL. YC
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Template Conservation                                          
                       
   
         
 
Template Sequence  RGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGS
Template Known Secondary structure  TT
TTS

TT
TTS
TT
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   318.320.........330.........340.........350.........360.........370.........380.........390.......
 
   399400....... ..410.........420.........430.........440....
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Query Sequence  IWAVVGSGA. . . . . . . . KEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISK
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Template Conservation         
 
    
                                   

 
Template Sequence  VAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP
Template Known Secondary structure  SS
SGGGGGS

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   398.400.........410.........420.........430.........440.........450.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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