Return to main results Retrieve Phyre Job Id

Job DescriptionP60061
Confidence1.97%DateThu Jan 5 12:06:40 GMT 2012
Rank39Aligned Residues35
% Identity14%Templatec2k1kA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.......
Predicted Secondary structure 






Query SS confidence 


































Query Sequence  SDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLAS
Query Conservation        

         
   

 

   
     
Alig confidence 


































Template Conservation 


































Template Sequence  SPPVSRGLTGGEIVAVIFGLLLGAALLLGILVFRS
Template Known Secondary structure 

SSSTT

Template Predicted Secondary structure 





Template SS confidence 


































   536...540.........550.........560.........570
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions