|   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
|
. | . | 160 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
| . | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
Query Sequence |   |
G | K | K | P | N | V | V | V | F | L | L | D | D | V | G | W | M | D | V | G | F | N | G | G | G | V | A | V | G | N | P | T | P | D | I | D | A | V | A | S | Q | G | L | I | L | T | S | A | Y | S | Q | P | S | S | S | P | T | R | A | T | I | L | T | G | Q | Y | S | I | H | H | G | I | L | M | P | . |
. |
P | M | Y |
Query Conservation |   |
  |
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   | . | . |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . |
|
|
|
|
|   |
|
|   |   |
|
|   |
|   |
|
|
|
|   |   | . |   |   |
|
|
|   |
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | R | P | P | H | L | V | F | L | L | A | D | D | L | G | W | N | D | V | G | F | H | G | S | R | I | R | . |
. |
. |
. |
T | P | H | L | D | A | L | A | A | G | G | V | L | L | D | N | Y | Y | T | Q | P | . |
L | T | P | S | R | S | Q | L | L | T | G | R | Y | Q | I | R | T | G | L | Q | H | Q | I | I | W | P | C |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  | S | S |
|
| T | T | S | S | G | G | G | T |
| S | S |
| . | . | . | . |
|  |  |  |  |  |  |  |  | T | S |  |  |  | T | T |  |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  | T |
|
| S | S |
|
|
| T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | |
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | P | G | G | L | Q | G | L | T | T | L | P | Q | L | L | H | D | Q | G | Y | V | T | Q | A | I | G | K | W | H | M | G | E | . |
N | K | E | S | Q | P | Q | N | V | G | F | D | D | F | R | G | F | N | S | V | S | D | M | Y | T | E | W | R | D | V | H | V | N | P | E | V | A | L | S | P | D | R | S | E | Y | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|
|   |
|   |   |   | . |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | P | S | C | V | P | L | D | E | K | L | L | P | Q | L | L | K | E | A | G | Y | T | T | H | M | V | G | K | W | H | L | G | M | Y | R | K | E | C | L | P | T | R | R | G | F | D | T | Y | F | G | Y | L | L | G | S | E | D | Y | Y | S | H | E | R | C | T | L | I | D | A | L | N | V | T | R | C | A | L | D | F | R |
Template Known Secondary structure |   |
|
|
|
| S |
| T | T |
|
|
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
|
| S |
|
| S | S | G | G | G | S | G | G | G | T | T |
| S |  |  |  |  |
| S | S | S |
|
|
| T | T | T |
|  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |
|
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . |
  |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | |
|
|
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
Query Sequence |   |
K | Q | L | P | F | S | K | D | D | V | H | A | V | R | G | G | E | Q | Q | A | I | A | D | I | T | P | K | Y | M | E | D | L | D | Q | R | W | M | D | Y | G | V | K | F | L | D | K | M | A | K | S | D | K | P | F | F | L | Y | Y | G | T | R | G | C | H | F | D | N | Y | P | N | A | K | Y | A | G | S | S | . |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | G | E | E | V | A | T | G | Y | K | N | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | S | T | N | I | F | T | K | R | A | I | A | L | I | T | N | H | P | P | . |
E | K | P | L | F | L | Y | L | A | L | Q | S | V | H | E | P | L | Q | V | P | E | E | Y | L | K | P | Y | D | F | I |
Template Known Secondary structure |   |
 | T | T |  |  |
|
| S |
| T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | . | T | S |
|  |  |  |  |  |  |
|
| T | T | S | S | S |
|
|
|
| G | G | G | T | G | G | G | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
198 | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | |
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
P | A | R | T | S | Y | G | D | C | M | V | E | M | N | D | V | F | A | N | L | Y | K | T | L | E | K | N | G | Q | L | D | N | T | L | I | V | F | T | S | D | N | G | P | E | A | E | V | P | P | H | G | R | T | P | F | R | G | A | K | G | S | T | W | E | G | G | V | R | V | P | T | F | V | Y | W | K | G | M |
Query Conservation |   |
. | . |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |   |
|   |   |
Template Sequence |   |
Q | D | K | N | R | H | H | Y | A | G | M | V | S | L | M | D | E | A | V | G | N | V | T | A | A | L | K | S | S | G | L | W | N | N | T | V | F | I | F | S | T | D | N | G | G | Q | T | L | A | G | G | N | N | W | . |
P | L | R | G | R | K | W | S | L | W | E | G | G | V | R | G | V | G | F | V | A | S | P | L | L |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  |  |  | S | S |
|
|
| G | G | G | T |
|
|
| T | . | T | S | S |
|
| T | T | S | S | S |  |  |  |  | B |
|
|  |  |  |  |
| T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | |
. | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |
  |   |
395 | . | . | . | |
. | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
460 |
Predicted Secondary structure |   |
|
|
|
| . |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
I | Q | P | R | . |
K | S | D | G | I | V | D | L | A | D | L | F | P | T | A | L | D | L | A | G | H | P | G | A | K | V | A | N | L | V | P | K | T | T | F | I | D | G | V | D | Q | T | S | F | F | L | G | T | N | G | Q | S | N | R | K | A | E | H | Y | F | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N |
Query Conservation |   |
  |   |   |   | . |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|   |
|   |
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | Q | K | G | V | K | N | R | E | L | I | H | I | S | D | W | L | P | T | L | V | K | L | A | R | G | H | T | N | G | T | K | P | . |
. |
. |
. |
. |
. |
. |
L | D | G | F | D | V | W | K | T | I | S | E | G | S | P | S | P | R | I | E | L | L | H | N | I | D | P | N | F | V | D | S | S | P | C | S | A | F | N | T |
Template Known Secondary structure |   |
S | S |
| S |  |  |  |
| S |
|  |  | G | G | G |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T | S |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| S |
|
|  |  |  |  |  |  |  | T | T |
|
|
|
| S |
|
|
|
| S |
| T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 |
  |
  |   |
461 | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | |
|
|
. | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | K | L | A | A | V | R | M | D | E | F | K | Y | H | V | L | I | Q | Q | P | Y | A | Y | T | Q | S | . |
. |
. |
G | Y | Q | G | G | F | T | G | T | V | M | Q | T | A | G | S | S | V | F | N | L | Y | T | D | P | Q | E | S | D | S | I | G | V | R | H | I | P | M | G | V | P | L | Q | T | E | M | H | A | Y | M | E |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
S | V | H | A | A | I | R | H | G | N | W | K | L | L | T | G | Y | P | G | C | G | Y | W | F | P | P | P | S | Q | Y | N | V | S | E | I | P | S | S | D | P | P | T | K | T | L | W | L | F | D | I | D | R | D | P | E | E | R | H | D | L | S | R | E | Y | P | H | I | V | T | K | L | L | S | R | L | Q | F | Y | H | K |
Template Known Secondary structure |   |
T | S |  |  |  |  |  |  | T | T |  |  |  |  |  | S |
|
| S |
|
|
| B |
|
|
| T | T | T |
| S |
| S |
| B |
|
| S |
|
| T | T |
|
|  |  |  |  |  | T | T | T |
| T | T |
|
| S |
|
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . |
  |
  |   |
538 | . | 540 | . | . | |
|
. | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
| . | . |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
. |
|
|
|
|
|
Query Sequence |   |
I | L | K | K | Y | . |
. |
P | P | R | A | Q |
Query Conservation |   |
  |   |   |   |   | . | . |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
H | S | V | P | V | Y | F | P | A | Q | D | P |
Template Known Secondary structure |   |
T |
|
|
|
|
|
|
|
|
|
| G |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
508 | . | 510 | . | . | . | . | . | . | . | . | . |
  |